Taeniopygia guttata (zebra finch): 100225445
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Entry
100225445 CDS
T01082
Symbol
FBN1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04350
TGF-beta signaling pathway
tgu04518
Integrin signaling
tgu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100225445 (FBN1)
09133 Signaling molecules and interaction
04518 Integrin signaling
100225445 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100225445 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tgu00536
]
100225445 (FBN1)
Glycosaminoglycan binding proteins [BR:
tgu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100225445 (FBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
EGF_PEAR1L
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
100225445
NCBI-ProteinID:
XP_030137627
LinkDB
All DBs
Position
10:complement(9818951..9963679)
Genome browser
AA seq
2832 aa
AA seq
DB search
MRPSFLVYSSWQAKPCVMQAGAGSASSAVAQRQGRPVPPCPPAALGLRCRRRRCWARLRA
AELPPHGSWWDRRVDSTCGTFPLLVQHCNIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCE
NGCLNGGRCVAPNRCACTYGFTGPQCERDYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCA
TVGRAWGHPCEMCPAQPHPCRRGFIPNIRTGACQDVDECQAIPGICQGGNCINTVGSFEC
KCPAGHKFNEVTQKCDDIDECSTIPGICDGGECSNTVSSYFCKCPPGFYTAPDGLKCIDV
RPGFCFSTLSNGRCGNQLPQPLSKMQCCCDSGRCWASAPATAPEMCPIRSTDEYRKLCTV
AAMLPARPDLPPARPDIIPPPHIPDVYPPPHPEIIYPSRAPPVHPILPVNLTDYCQAFRH
LCRNGRCIPTPGSYRCECNKGFQLHGREECLDIDECERNPCVGGDCVNTQGSYVCQCRVG
YQSTATRTECRDIDECLQNGRICNNGRCINTDGSFHCVCNAGFQVAADGKNCEDMDECSI
RNICLNGMCINEDGSFKCICKPGFQLASDGRYCTDINECETDGICMNGRCVNTDGSFRCE
CFPGLAVGLDGRVCVDTHMRSTCYGGYKRGQCVRPLTGAVTKSECCCASTDYAFGEPCQP
CPAQNSAEYQALCSSGTGMTAGGNDINECLLDPDLCPNGRCENLHGTYKCYCDPGYEVDS
TGKNCIDIDECVLNMLLCDNGQCRNTPGSFTCTCPKGFVYTPDLKTCEDIDECESNPCVN
GVCKNTPGSFVCECSPESTLDPTRTICIETVKGTCWQNIVNGRCEININGATLKSQCCSS
LGAAWGSPCTPCERDPICQKGYSRIRGTLCEDVNECEVFPGVCTNGQCVNTLGSFVCQCP
SGMTLDASGRTCLDIRLESCYLQHEDEQCTSQIPGRHRMDACCCSVGAAWGHECEECPLR
GTPEFEALCPRGPGFSTKIEISGKPFSKDINECKMFPSLCTHGKCRNTIGSFKCRCDSGF
ALDSEERNCTDINECHISPDLCGQGRCINTPGDFKCECFEGYESGFMMMKNCMDIDECQR
NPLLCRGGTCINTEGSFRCDCPPGHQISPNISACVDINECELSTNLCRNGRCVNLIGKYQ
CACNPGYQSTQDKLYCIDIDECKIMNGGCEDFCTNSEGSYECSCKQGFALMPDHRTCTDI
DECEDNPNICDGGQCTNIPGEYRCLCYDGFMASEDMKTCIDVNECDLHPNICLSGTCENT
KGSFICHCDMGYSGKKGTTGCTDINECEIGAHNCDRHAICTNTAGSFKCSCSPGWIGDGI
KCTDLDECSNGTHMCSPHADCKNTMGSYRCLCKEGYTGDGFTCTDLDECSENLNLCENGQ
CLNAPGGYRCECEMGFLPSVDGKACEDIDECSLPNICVYGTCHNLPGLFRCECEVGYELD
RSGGNCTDVNECADPTTCISGTCINTAGSYTCECPPDFELNPTRVGCVDTRSGNCYLDIK
TRGDNGGTFCSNEIGVGVSKASCCCSLGKAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNP
ITVILEDIDECQELPGLCQGGKCINTFGSFQCQCPSGYYLNEETRVCDDVNECETPGICG
PGTCYNTVGNYTCICPPDYMQVNGGNNCMDMRRSLCYRNYYADNQTCDGELLFNMTKKMC
CCSYNIGRAWNKPCEQCPIPSTDEFSTLCGSQRPGFFIDIYTGLPVDIDECREIPGVCEN
GICINMVGSFRCECPVGFFYNDKLLICEDIDECQNGPVCQQNAECVNTAGSYRCDCKPGY
RFTSTGRCADRNECQEIPNICSHGQCIDTVGSFYCICHNGFKTNDDRTMCIDINECERDA
CGNGTCRNTIGSFNCRCNLGFILSHNNDCIDVDECASGNGMLCRNGQCVNTIGSFQCLCN
DGYEVAVDGRTCVDINECALDPGKCSPGTCQNLDGSFRCICPPGYILQNDKCEDIDECVE
QPEICALGTCSNTPGSFKCLCPEGFVLSSTGRRCQDLRVSYCFTKFEDGKCSVPKSRNHS
KQECCCALKGQGWGDPCELCPEEADEAFRQICPFGIGILVGPGDARLDVDECLDPDNCKF
GQCINTDGSFRCECPYGYILQGAECVDTDECAVGNPCGNGTCRNVIGGFECTCVEGFEPG
PMMTCEDVNECIQNPLLCAFRCVNTFGSYECKCPGGYVLREDRRMCRDQNECEEGIHDCD
SKQMECKNLIGTYMCICGPGYQRRPDGEGCIDENECQTKPGLCENGRCLNTLGSYRCECN
EGFTVSDTQDECLDNREGYCFTEVLQSMCQIGSSNRNAVTKSECCCDGGRGWGQNCEVCP
FPGTVAFKKLCPHGRGYTSSGADIDECKVIHDVCRNGECINERGTYHCLCNLGYTTDVTG
TLCIDLNECNESPKPCNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATKQHNCQFL
CVNTIGGFTCKCPPGFTQHHTACIDNNECATEINLCGAKGICQNTPGSFVCECQRGFSLD
QTGQSCEDVDECDGNHRCQHGCQNIIGGYRCSCPQGYLQHYQWNQCVDENECLSAHICGG
ASCHNTLGSYKCMCPTGFQYEQFSGGCQDINECGSAQAPCSYGCSNTEGGYVCGCPPGYF
RIGQGHCVSGVGLGRGQGQELSLSGEVDDNSLSPEACYECKINGYPKRGRKRRSTNETAS
EAEDQQELEPPISLASWDIEKAAVFSINISDLSNKDRILELLPALTTLTNHNRYLIDSGN
EDGFFRINKKDGISYLHFTKKKPVPGNYSLQISSIPLYKKKELNQLEAKHDKDYLSGELG
DNLKMKIQILLH
NT seq
8499 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgtcattccttgtttacagctcctggcaggcaaagccctgcgtcatgcaggcc
ggggctgggagcgcttcctcggcagtggcacagaggcagggccggcctgtcccgccgtgc
ccgccggccgcgctgggactcaggtgccggcggcgccgctgctgggcccgcctgagggcc
gcagagctcccgcctcacggttcttggtgggatcgcagagtggacagcacatgtggtacc
tttcctctgcttgtccaacactgtaacatccggtgcatgaacgggggtagctgcagtgat
gaccattgcctctgtcagaagggatacacgggaactcactgtggacagcctgtctgtgaa
aatggatgtctaaatggagggagatgcgtagctccaaaccgatgtgcttgcacgtatggc
tttactggaccccagtgtgagagagattacaggaccggcccttgcttcactttggtaacc
aaccagatgtgccagggccagctcagtggaattgtctgcacaaaaaccctgtgctgtgca
actgttgggagagcgtggggccatccctgtgaaatgtgtcctgcccagccgcatccctgc
cgccgaggcttcattccaaacattcgaacgggggcctgtcaagatgtggatgaatgccaa
gccatccctgggatctgtcaagggggaaattgcattaatactgttggatcttttgagtgc
aaatgcccagctggacacaagtttaatgaagtaacacaaaaatgtgatgatattgatgaa
tgtagcaccattcctggaatttgtgatggaggggagtgttcaaacacagttagcagttac
ttctgcaagtgtcctccagggttttatactgctcctgatggcttaaaatgcatagacgtg
cgccctggattctgcttctccacgctgagcaacgggcgctgcggcaatcagctgccgcag
cccctatccaagatgcagtgctgctgtgacagcggccgctgctgggcctctgctcccgcc
accgctccagaaatgtgccccatccgatccaccgacgagtatcgtaaattgtgcacagta
gctgctatgctgccagcaagacctgaccttccaccagcccgtcctgacatcatccctcca
ccacacattcctgatgtttaccctcctccacacccagaaatcatctatccatctcgggct
ccaccagttcatccgatcttgccggtgaacttaactgactattgccaagcattccgacat
ctctgccgaaatggacgttgtattcccactcctgggagctaccgctgcgagtgcaacaaa
ggattccagctgcatggtagagaggaatgccttgatattgatgaatgtgaaaggaatcca
tgcgttggtggagactgtgtgaacacacaaggatcctacgtctgccagtgtcgtgttggg
tatcagagcacagccaccagaacagagtgccgagacattgatgaatgcttacagaatggt
cgtatctgtaataacggacgatgcataaatacagatggcagttttcactgtgtgtgtaat
gctggctttcaagtggcagctgatgggaaaaactgtgaagatatggatgaatgcagcatc
aggaacatttgcctcaatgggatgtgcatcaatgaagatggcagttttaaatgcatttgt
aaaccagggttccagttagcatctgatggacgatattgcacagacatcaatgagtgtgag
acagatggaatatgcatgaatgggcgctgtgtgaacactgatggctctttcagatgtgaa
tgcttccctggccttgcagtaggactggatggacgtgtctgtgttgatacacatatgcga
agcacatgctatggtggctacaagagaggacaatgtgtgagaccattaacgggtgcagtt
acaaagtcagaatgctgctgtgccagcactgactatgcctttggagagccttgccagccc
tgcccagcacaaaactcagctgaatatcaggctctgtgtagcagtggaactggcatgact
gcaggaggaaatgatattaatgagtgcttattggatcctgatctctgtccaaatggaagg
tgcgagaacctgcatggaacatacaaatgttattgtgaccctggatatgaagtagactca
actgggaaaaactgcattgatattgatgaatgtgtgctgaacatgctgctttgtgacaat
gggcaatgtagaaatacccctggaagtttcacctgcacctgtccaaaaggatttgtatac
actcctgatctaaaaacgtgtgaagatattgatgaatgtgaatctaacccctgtgttaat
ggagtgtgcaaaaacacaccaggttcttttgtctgtgaatgttctcctgaaagtactttg
gatccaaccagaaccatctgcatagaaactgtgaagggtacctgttggcagaacatagtc
aatggaaggtgtgaaataaatatcaatggagcaactctgaagtcccagtgctgttcctca
ctaggtgctgcttggggaagtccttgtacaccatgtgaacgagacccaatatgtcaaaag
ggatattcaagaataagaggaacattgtgtgaagatgttaatgaatgtgaggtgtttcct
ggagtctgtacaaatgggcagtgtgtcaataccttgggatcatttgtttgccagtgcccc
agtggaatgactttagatgcttctggacggacttgtcttgacattcgcttggagagttgc
tacctgcagcatgaggacgagcagtgcacgtcccagatcccaggccggcaccgcatggac
gcctgctgctgctccgtgggggcagcctggggccacgagtgcgaggagtgtcctctcagg
ggaactcctgagtttgaagctctttgcccaaggggacctggcttctctacgaagatagaa
ataagtgggaagcctttctctaaagatatcaatgaatgcaaaatgttccccagcctttgt
acccatggaaaatgcagaaataccattggcagttttaagtgtagatgtgacagtggattt
gccctcgattctgaagagaggaattgcacagatatcaatgaatgccacatctctcctgat
ctttgtggccaaggcagatgtatcaatactcctggagacttcaagtgtgaatgttttgaa
ggctatgaaagtggatttatgatgatgaaaaactgcatggacattgatgagtgtcagcgc
aatccccttctctgccgaggtggcacctgcatcaacacagagggaagttttcggtgtgat
tgccctccaggccatcagatatcaccaaatatctctgcatgtgtagacattaatgaatgc
gagctgagcaccaacctgtgccgaaatggccgttgtgtcaaccttattggaaagtatcag
tgtgcttgcaaccctgggtatcagtccacacaagacaagctatactgtattgatattgat
gagtgcaaaataatgaatggtggctgtgaggacttctgtacaaactcagagggcagctat
gaatgtagctgtaaacaaggctttgcactcatgccagaccacaggacatgcactgatatt
gatgagtgtgaagacaatcctaacatctgtgatggaggccagtgtacaaacatcccagga
gaatacaggtgtctttgctatgatggattcatggcatctgaagacatgaagacttgcata
gatgttaatgagtgtgatctgcatccaaacatctgtctgagtggaacctgtgagaataca
aaaggctcatttatctgtcactgtgatatgggatattcaggcaagaaaggcacaactggt
tgcacagatatcaatgagtgtgaaattggagcccataactgtgacaggcacgccatatgt
acaaacacagcaggaagcttcaaatgtagctgcagccctggctggattggagatggtatc
aagtgcacagatctggatgagtgctccaatggaacccacatgtgcagcccacatgctgac
tgcaagaatacgatgggctcttaccgctgcctgtgtaaagaaggttacactggggatggt
ttcacttgtacagatctcgatgaatgctcagaaaacttgaatctctgtgaaaatgggcag
tgcctcaatgcccctggagggtatcgctgtgaatgtgaaatgggatttttgccaagtgta
gatgggaaagcatgtgaagatattgatgagtgctcacttcctaacatctgtgtctacggt
acttgtcataacctccctggactcttccgatgtgagtgtgaggtgggctacgagttggac
agaagtggtggcaactgcacagatgttaatgaatgtgcagaccctacaacctgcattagt
ggcacgtgtatcaacactgctggtagttacacctgtgagtgccctcccgatttcgagctg
aatcccacccgcgttggatgcgttgatacacgatctggcaactgttacctggacatcaaa
actcggggagataacggtggcaccttctgcagcaatgagatcggagtgggtgtttccaag
gcctcctgttgctgctccctgggcaaggcctggggagttccctgtgagcactgcccactg
gtgaacacaactgaatataaagttctttgccctggaggggaaggattcagaccaaaccct
attacagttatattagaagatattgatgaatgtcaagaactgcctggcctttgccaagga
ggaaaatgtattaatacatttggtagcttccagtgtcagtgtccttcagggtactacttg
aatgaagagactcgagtgtgtgatgatgtgaatgagtgtgagacacctggcatttgtggg
cctggcacgtgttacaatactgttgggaactacacctgcatctgccctcctgattacatg
caagtcaatggaggaaacaactgcatggatatgagaagaagtctgtgttatagaaattac
tatgctgacaatcaaacctgtgatggtgagctgctcttcaatatgaccaagaaaatgtgc
tgctgttcctacaacattggacgtgcatggaataagccttgtgaacagtgtcctatccca
agcacagatgaattctccacactctgtggaagtcaaaggcctggcttcttcattgacatt
tatacaggattaccagttgatattgatgaatgcagagagattcctggagtgtgtgaaaat
gggatctgtataaacatggttggcagcttccgatgcgagtgtcctgtgggcttcttctac
aatgacaagctcctgatctgtgaagatattgatgaatgccagaacggaccagtttgccag
caaaacgcagagtgtgtgaacacagctgggagctaccgctgcgactgcaaacctggctac
aggttcacatccactgggcgctgcgctgatcggaatgaatgccaagaaattcccaatatc
tgcagccatgggcagtgtattgacaccgttggaagtttctactgcatttgtcacaatgga
ttcaaaaccaatgatgacaggacaatgtgtatagatattaatgagtgtgagagagatgcc
tgcggcaacggaacctgccggaacaccattggctccttcaactgccgctgcaacctgggc
ttcatcctctcccacaacaacgactgcatagatgtggatgagtgtgcaagtggaaatgga
atgctctgcagaaatggtcagtgtgtgaacaccattgggtccttccagtgtctctgcaat
gatggctatgaggtggctgtggatggaaggacatgtgttgatatcaatgagtgtgcactg
gaccctggaaaatgctcaccaggcacatgccagaacttggatggctcattcagatgtatc
tgtcctcctggatacatcctgcagaatgacaaatgtgaagacattgatgagtgtgtggaa
cagccagaaatttgtgccctgggcacatgcagcaacactccaggcagcttcaaatgtctg
tgtccagaaggctttgtattgtcttccacaggaaggcgatgccaagatctgagagtgagc
tactgctttaccaagtttgaagatgggaagtgttctgtgccgaagtcccgaaaccactcc
aaacaggagtgttgctgtgccttgaaagggcagggatggggagatccctgtgagctctgc
ccagaggaagcagatgaggcattcagacagatttgtccatttggaattggtatccttgtt
ggacctggtgatgcgagactggatgtggatgagtgccttgatcctgataactgtaaattt
gggcagtgtatcaacacagatgggtctttccgctgtgaatgtccatatggttacatccta
caaggagcagaatgtgtggacactgatgaatgtgctgttggaaacccatgtggaaatgga
acttgcaggaatgtgataggaggctttgaatgcacctgtgtagaaggatttgagcctggg
ccaatgatgacctgtgaagatgtgaatgagtgcattcagaaccctctgctctgcgctttc
cgctgcgtgaacacttttggatcctacgagtgcaagtgccccggggggtacgttctgcgg
gaggaccggagaatgtgcagagatcagaatgagtgtgaagaaggaattcatgactgtgac
tcaaagcagatggaatgcaaaaacctaattggcacctatatgtgtatctgtggccctggt
tatcagcgcagaccagatggggaaggctgtatagatgagaatgaatgtcagaccaaacct
gggctctgcgagaacggccgttgtttgaacacactggggagttacaggtgtgagtgcaac
gagggattcacggtcagtgacacccaggatgagtgccttgacaacagggagggctactgc
ttcactgaagtcttacaaagtatgtgccaaattggatcgagcaacaggaacgctgtcacc
aagtctgaatgctgctgtgacggtggccgaggctgggggcagaactgtgaggtctgtccc
ttcccaggcaccgtggccttcaagaagctttgccctcatggccgaggatacacatccagt
ggagcagatattgatgagtgcaaggttattcatgacgtctgccgcaacggggagtgcatc
aatgagaggggaacttaccactgtctttgcaatctgggctatactacagatgtcaccggc
actctttgcattgatctgaatgaatgcaatgagtctccaaaaccttgcaatttcatctgc
aaaaacacagaggggagctaccagtgttcatgtccaaaaggatacatcctgcaagaagat
gggagaagctgcaaagatcttgatgaatgtgcaacaaagcagcacaactgccagttcctt
tgtgtcaacactattgggggattcacttgcaaatgtcctcctggattcactcagcaccat
acagcctgtattgacaacaacgagtgtgctactgagatcaatctttgtggggcaaagggc
atttgccagaatacaccgggaagttttgtttgtgagtgtcagcgtggcttctcacttgat
caaactgggcagagctgtgaagatgttgatgaatgtgatggtaaccaccggtgtcagcat
ggctgccaaaatataattggaggatacaggtgcagctgcccacaaggatatctccagcat
taccagtggaaccaatgtgttgatgaaaatgaatgtctcagtgcacacatttgtggagga
gcatcctgccacaatactttgggaagctataaatgtatgtgccctactggatttcagtat
gagcagtttagtggaggttgccaagatatcaatgaatgcggttctgcacaagccccgtgc
agttatggttgttcaaacactgaaggtggctacgtctgtggatgtccacctggttacttc
agaataggacaaggacactgtgtttctggagtggggctaggcagaggtcaaggacaagag
ctttcactcagtggagaagtagatgacaattccctctctccagaagcttgttatgaatgt
aaaatcaatggctatcccaagagaggaaggaagcgcaggagcactaatgaaactgcaagt
gaagcagaggatcagcaagagttggagccgccaatcagtctcgccagctgggatattgag
aaagcagcggtcttctccatcaacatctcggatctcagtaacaaagatcgcatcctggaa
ctgctccctgccctcacaacactgacaaaccataaccgatatttaattgactccggaaat
gaagatggtttctttagaatcaataagaaggacgggataagttaccttcatttcacaaag
aagaagccagtgcctggaaattattcattacaaatcagtagtattccactctataaaaag
aaggaacttaaccagcttgaagcaaaacatgacaaagactacctcagtggtgagctggga
gataacctgaaaatgaaaattcagatattgcttcattaa
DBGET
integrated database retrieval system
