Taeniopygia guttata (zebra finch): 100226499
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Entry
100226499 CDS
T01082
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tgu01009
]
100226499 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100226499 (TRPC5)
Protein phosphatases and associated proteins [BR:
tgu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100226499 (TRPC5)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100226499 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
100226499
NCBI-ProteinID:
XP_030128761
Ensembl:
ENSTGUG00000006117
UniProt:
H0Z6X7
LinkDB
All DBs
Position
4A:17178669..17278774
Genome browser
AA seq
989 aa
AA seq
DB search
MAQLYYKKVNFSPYRDRIPLQIVRAEAELSSEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGDDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKEETNEDGAGEKPRAKSVSFNVANKKKDFNVSALIKTMSGMNMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSP
MDREREENCSKSEINLNEVAYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtcaacttctccccgtaccgagaccggatcccactc
cagatcgtgcgagcggaggcagagctctcgtcggaagagaaagcctacctcagtgctgtg
gagaagggggactatgccagcgtgaaacatgccttgcaggaggcagagatctactacaac
atcaacattaactgcatggatcctctggggcgcagtgccctcctcatagccatagagaat
gagaacctggagatcatggagctgctgctgagccacagtgtctacgtgggggatgctctg
ctctacgccatacggaaggaggtggtgggagctgtggagctgctgctcaattacaggaag
cccagtggtgaaaaacaggttccaaccctgatgatggacacccagttttcagagttcact
ccggatatcacccccatcatgctggcggctcacaccaacaactacgagatcatcaaactg
cttgtccaaagacgggtgacgatcccacgcccacaccagatcaggtgcaactgtgtggaa
tgtgtctccagctccgaggtggacagcctgaggcattccaggtcgaggctgaacatctac
aaagccttagccagcccttcgttgattgccttatcgagcgaggatcccatcctgaccgcc
ttccgcctgggctgggagctgaaggagctgagcaaggtggaaaatgagttcaaggctgag
tatgaggagctttcacagcagtgcaagcgttttgctaaggaccttttggatcaagcacgg
agttcccgggagctggagatcattctcaatcatagggatgatcagagtgaagagctggat
ccccaaaaatgtcacgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccgaactgccagcagctactagcaacgctttggtacgacggctttcca
ggatggaggaggaaacactgggcagtgaaactcctgacctgtgtcaccatcggactgctg
ttccccgtgctatccgtggcgtacctgattgcacccaagagcaggctgggactgttcatt
aaaaagccatttatcaagtttatctgccacactggctcctacctgaccttcctgttcatg
ctcctgctggcgtcgcagcacatcgtcaggaccgacctccacatgcaggggccacctccc
accatcgtggagtggatgatcctgccctgggttctgggtttcatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtacatgactggtggaatctgatggatttt
gcaatgaactccctctatcttgcaaccatctcccttaaaattgttgcctatgtcaagtac
aacggctcccgcccgagggaggagtgggagatgtggcacccgaccctgattgcagaagct
ctctttgcaatatccaacatcctgagttccctgcggctcatctccctgtttacagccaac
tcacacctgggacccctgcagatttctctgggacgcatgctgctagacatcctcaaattc
ctttttatctactgcctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcactcttctggtctgtgttt
gggctgctgaatctctacgtcaccaacgtgaaggccagacacgagttcacagaatttgtt
ggggccacaatgtttgggacctacaacgtcatctccctggtcgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccacgcggacatcgagtggaag
tttgcgcggacgaagctctggatgagttacttcgacgaaggtgccactctgccccctcct
tttaacattgtccccagtcccaagtcggtctggtacctttgcaagtggatccacaaccag
ctgtgcccaggagatgactctgacaacgaacagaagaggcacgaaaacctcaaaacattc
acagaacgtcacgctgacaacctgattcaaaatcaacattaccaggaagtgataagaaat
cttgtgaaaagatacgtcgctgcaatgataagaacttccaaaaccaatgaaggtttaact
gaagaaaacttcaaggaattaaaacaggacatctcgagttttcgctatgaagttcttgac
ctcttaggcaacaggaagccccagaggagaagttactctaccagcagcacagaggtatcc
caaaaggaggaaacaaacgaggacggtgctggagaaaagcccagagccaagagcgtgtct
ttcaatgtagccaacaagaaaaaggacttcaacgtgtctgctctgattaaaaccatgtct
gggatgaacatggtggaggagaagccaaaaagcaacgggatcagcaagcgctcctttgtg
cgaaacgggaacagagtgcagagactctccagctccaagaaggaatccttcaagaggctg
ggcctgctcttctccaagatgaacggccacgtccccgagcccagctcagagcccatgtac
accatttcagacggcatcattcagccccactacatgtggaaagacattaaatattctccc
atggacagagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtggcc
tacagtgggaacacgagacttacaggacagagcaaggagtgccctgtggtttgtaccagt
tcccttcactgtgcttccagtatttgttcctctaactccaaacttatagactcgtcagag
gatgtgtttgattcatggggagaggcctgtgacttgtttataaaccagtggaaagacggg
caggaggatcatgttaccactcggctctga
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