Taeniopygia guttata (zebra finch): 100226525
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Entry
100226525 CDS
T01082
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100226525 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tgu04131
]
100226525 (C9orf72)
Membrane trafficking [BR:
tgu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100226525 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
100226525
NCBI-ProteinID:
XP_002192828
Ensembl:
ENSTGUG00000001401
UniProt:
A0A674H7K9
LinkDB
All DBs
Position
Z:complement(34518113..34534780)
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLTGKSPLLAATFAYWDNILGPRVRHIWAPKTEQVHLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLINAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDLIIHTDESF
TPDLNIFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccgtctcctgcagttgctaagacagagatttctttgact
ggcaagtcaccattattagctgccacttttgcttactgggataatattcttggcccccga
gtgcggcacatctgggctccaaagacagaacaggtacatctcagtgatggtgaaataact
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcagaaagtggtgcaata
gatgtgaagttctttgttttggctgaaaaaagagtaatcattgtgtcattaatctttgat
ggaaactggaacggagacagaagcacatatggactatcaattatacttccacaaagcgaa
cttggtttctacctgccacttcacagagtgtgcgtggataggttaacacatattataagg
aaaggaaggatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacagaaagaatggaggatcagggtcagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaacttctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
atcaatgcaattagttcacacctacagacctgtggttgttctgtagttgtaggaagcagc
gcagaaaaagttaataagattgtgagaacgttgtgcctgtttctcacaccatctgagcgg
aagtgttccagactctgtagaagtgagtcctctttcaaatatgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgccattccgtcaagtaatgtat
gccccataccctactacacatatagatgtggacgtcaatacagtgaagcagatgccccct
tgtcatgaacacatctataaccaacgacgatacatgagatctgagctgacagcattttgg
agagctaattcagatgaggaaatgtctcaagatcttattatccacacagatgagagtttc
acacctgatttaaacatctttcaagatatcgtgcatagagatacattagtaaaagccttc
ctggatcagatctttcacctgaagcctggcttgtctctaaggagtacttttcttgctcaa
tttcttctagtgcttcacagaaaagccttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttaaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacac
tcctttatcttcgggaggccgttctacactagtgtacaagaacgtgacatgcttatgaca
ttttaa
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