Taeniopygia guttata (zebra finch): 100229606 Help Entry 100229606         CDS       T01082                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04010   MAPK signaling pathway tgu04120   Ubiquitin mediated proteolysis tgu04140   Autophagy - animal tgu04144   Endocytosis tgu04620   Toll-like receptor signaling pathway tgu04621   NOD-like receptor signaling pathway tgu04622   RIG-I-like receptor signaling pathway tgu05132   Salmonella infection tgu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:tgu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100229606 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100229606 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100229606 (TRAF6)    04140 Autophagy - animal     100229606 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100229606 (TRAF6)    04621 NOD-like receptor signaling pathway     100229606 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100229606 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     100229606 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100229606 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tgu04131]     100229606 (TRAF6)    04121 Ubiquitin system [BR:tgu04121]     100229606 (TRAF6) Enzymes [BR:tgu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100229606 (TRAF6) Membrane trafficking [BR:tgu04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100229606 (TRAF6) Ubiquitin system [BR:tgu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100229606 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX PspA_IM30 Med21 RING_XB3-XBAT31 TRAF3_RING zf-RING_11 Sina_ZnF HAP1_N DUF4455 U-box UPF0242 CENP-F_leu_zip HMMR_N Spc29 ATG16 DUF1664 DUF16 PUMA_CC DUF2730 ADIP Cortex-I_coil Motif Other DBs NCBI-GeneID:  100229606 NCBI-ProteinID:  XP_030129966 Ensembl:  ENSTGUG00000010139 UniProt:  A0A674GMY7 LinkDB All DBs Position 5:complement(19207623..19229441) Genome browser AA seq 545 aa AA seqDB search MSLLHSDSSCGGRDAESGCCAAMASACSAAAKEESSSVGSAVGTAPGSFGEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNHLKEHMTQ ECPRRQVCCPNCATSMAYEDKELHDQTCPLANIYCEYCNTVLIREQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFINGLPFEPAL FSHVSHAAYNCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQRAQEEERPVVLHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLETLKQRTFIKDDTLLVRCEVLTRLDLSSVRREGFQPRS TDGAM NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctgcacagtgacagcagctgtggaggccgagatgcggagagcggctgctgc gcagccatggccagcgcctgcagcgccgcagccaaggaggagagctccagcgtgggcagc gccgtgggcaccgcgcccggctccttcggcgaggagacgcagggctacgacgtggagttc gatccgccgctggagagtaaatacgagtgtcccatctgcctgatggctctccgggaagcg gtgcagacgccgtgcggccaccgtttctgcaaaggctgcatcgtcaaatcaatcagggat gcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcctgac aacttcgccaaacgggaaatactttcattaatggtcaaatgtcccaacaagggctgcagc atgaagatggagctcaggcacttagaggaccaccagctgcagtgtgatttttccactgtg gaatgcctgcagtgccaaggaaccttcccaaagaaccatctgaaagagcacatgacccaa gagtgtccaaggcgtcaagtgtgctgcccaaactgtgccacgtctatggcctatgaagat aaagagcttcatgaccaaacctgcccacttgccaatatatattgcgaatattgcaacaca gtgctcatcagggagcagatgcctaaccactatgacaatgattgtcctactgccccagtg ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacgg catatgcaggagttcactcaggttcacatgaggatgatggctcagagttttcaaaatatc agtgttactgctgcaaatcctgtacctttcatcaatggcctgccctttgagcctgccctt ttctcacacgtgtcacatgctgcgtacaactgcaatccagaagttgaaaacttcaaggaa actattcagcagttggaaggtcgtctggtgagacaagatcaccaaatcagggaactcatt gctaaaatggagacgcagaacactcacatggcagaactcaaacgtactatccgaaatttg gagggaaagattactgaaatggaggcacaacaatgcaatggtatttatatctggaagatt gagaacttcagtggactgcagagagcccaggaagaagagagacctgtagtgttgcacagt cctggcttctatacagggaagcctggctacaagctgtgcttgcgcctgcatatccagtta ccaaatgctcagcgctgtgctaattttatctctctgtttgtgcacactatgcaaggggaa tacgacagccacctgccctggcctttccaaggcaccattcgactttctattttggatcaa tcagaaggcccagaaaggcagaaccatgaagaggtgatggaagccaagccagagctactg gccttccagagaccgacaattcaccgcaatccaaaaggttttggttatgtgactttcatg cacctggagaccttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgctgc gaggtcctcacgcgcctggacttgagcagcgtccgcagggaagggttccagccccgcagt actgatggagccatgtag

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