Taeniopygia guttata (zebra finch): 100230636 Help Entry 100230636         CDS       T01082                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism tgu  Taeniopygia guttata (zebra finch) Pathway tgu04115   p53 signaling pathway tgu04145   Phagosome tgu04148   Efferocytosis tgu04350   TGF-beta signaling pathway tgu04510   Focal adhesion tgu04512   ECM-receptor interaction tgu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:tgu00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     100230636 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100230636 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100230636 (THBS1)    04148 Efferocytosis     100230636 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     100230636 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     100230636 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100230636 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tgu04131]     100230636 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:tgu00536]     100230636 (THBS1) Membrane trafficking [BR:tgu04131]  Endocytosis   Phagocytosis    Opsonins     100230636 (THBS1) Glycosaminoglycan binding proteins [BR:tgu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100230636 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  100230636 NCBI-ProteinID:  XP_030130374 LinkDB All DBs Position 5:complement(30242935..30258753) Genome browser AA seq 1177 aa AA seqDB search MGPATALCLLLLVLGGSETKRTAESRNDDNSVFDLFELIGFMRKGAGRRAPGVYLVKGPE SSSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQNDGS GHVFSLVSNGKAGSLDLSLSVDGKQQLVSVEDVLLATGHWKNITLFVQEDRAQLYVGCEK MENAELDIPIQNIFTRDLASSARLRIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCS SSTSAVITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTL QDRVRKVTEENEIIAKVVQITPGACIHNGVLHKNKEEWTIDSCTECTCQNSATICRKVSC PLMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRC EGSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKP CEGEARENKACQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVG EARGTQVCNKQDCPIDGCLSNPCFAGAACTSAPDGSWKCGACPAGYHGDGIHCQDIDECK EVPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMSNKQVCKPRNPCTDG THDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHC KKDNCPNLPNSGQEDYDKDGIGDACDSDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDR CDNCPYNHNPDQTDTDNNGEGDACAIDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQC DNCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDA CDHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDIDDICPENVEIS ETDFRKFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF INTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPG EHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMA DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt atggggccagcgactgctctctgcctccttctcctcgtgctcggcggctcagagaccaag cgcactgcagaatccaggaatgatgataacagcgtcttcgatctctttgagctcattggc ttcatgcggaagggagcggggcgccgggcccccggggtgtacctggtgaagggaccagaa tcctccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccccgactca aagttccaagacttattagatgccatccatgctgagaagggcttcattctcctggccact ctccggcaagccaagaagagcagaggcacactgctgtctgtggaacagaacgatggctct ggtcatgtcttcagtctagtatcaaatggcaaggcaggctccctggacctgagcctttct gttgacggcaagcagcagttagtgtcagtagaggatgtcttgctagctacaggacattgg aagaatatcaccctgtttgtgcaggaggaccgagctcagctctatgtggggtgtgagaaa atggaaaacgctgaactggacatccccatccagaacatcttcactagggacctggccagc agtgccaggctccgtattgccaaagggggagtcaatgacaacttccagggtctgctgcag aatgtgcggtttgtgtttggaacaactctggaaactatcctgcggaacaaaggctgctcc agctccactagtgcagtcattaccttggacaaccccatcaatggttccagcccagctatc cgcactaattacattggccataaaacaaaggacatccaagcagtctgtggattttcctgt gatgaactaacaaatatgtttgtggaactgcaagggctacggtccatggttacaacactt caagacagagttcgaaaagtgactgaagaaaatgaaatcattgccaaagtagtccagatc actcctggagcatgcattcataatggagtcttgcacaaaaataaagaggagtggactatt gacagctgcactgaatgtacttgccagaactctgccactatatgccggaaagtgtcctgt cctctcatgccttgttccaatgccaccgtgcctgatggggagtgctgccctcggtgctgg cctagcgactacgcagacgatggatggtctccttggtctgaatggacctcgtgttccgtg acctgtggtaatgggattcagcagagaggccgttcctgtgacagtctcaataaccgctgc gaaggctcctctgtacagactcggacttgccaccttcaggagtgtgataagagatttaaa caggatggtggctggagtcactggtcgccatggtcatcatgttctgtcacttgtggcacg ggcatcattactagaattcgtctttgcaactctccagtaccacagctgaatggcaaacca tgtgagggtgaagcaagagaaaacaaagcctgccagaaagatccttgcccaattaatggc aactggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcag aaacgaagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgtgtaggt gaagctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtct aatccctgcttcgcgggggctgcgtgcaccagtgcccctgatggttcctggaagtgtggt gcctgtcctgctggctaccatggtgatggtattcactgccaagatattgatgagtgcaaa gaggttcctgatgcctgctttgtcttcaatggagtgcacaggtgtgagaatactgaacct gggtacaactgtctgccttgcccaccacgtttcactggaacacagccatttggccgcagt gttgaggatgccatgagtaacaaacaggtctgcaagccacgtaatccatgcacagatgga acacatgactgcaacaagaatgccaaatgcaattaccttggccactttagtgaccccatg tatcgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatact gacttggatggatggccaaatgagaacctggtttgtgttgccaatgctacttaccactgt aaaaaggataactgccctaatctgcctaactcagggcaggaagactatgataaggatggg attggtgatgcctgtgacagtgatgatgatgatgatggcattcctgatgaccgggacaac tgtccattcatctacaacccacagcagtatgactacgacagggatgatgttggtgaccgc tgtgacaactgtccctacaatcacaaccctgatcaaactgacactgacaacaatggagaa ggggatgcatgtgcaatagatattgatggagatggtgtgcttaatgaaagggacaactgc cagtatgtgtacaatgtagaccagagggatacagacttggatggtgttggagatcagtgt gataactgtccactggaacacaaccctgaccaggaagacaccgattctgatcgcataggt gatcagtgtgacaacaaccaggacatagatgaagatggtcatcaaaataaccttgataac tgcccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcc tgtgaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggtt gccaacccagatcaagctgattctgatggtgatggacgtggagatgcttgcaaagatgac tttgaccaagacagtgtgccagacattgatgatatctgccctgaaaatgtggaaattagt gagactgatttccgaaaatttcagatgattccgctggatcccaaaggaacatcccaaaat gatccaaactgggttgttcgtcaccagggtaaagagctggttcagacagtcaactgtgac cctggccttgcagttggttttgatgaattcaatgctgtggacttcagtggtaccttcttt atcaatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagt cgtttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaacc aaagctcaaggctattcaggtctctccatcaaagttgtgaattccaccactggtccagga gaacaccttcgtaatgctttgtggcacacaggaaacactcctggccaggtgagaactttg tggcatgatcctcgtcacataggctggaaagacttcactgcatacagatggcgacttagc catagaccaaagaccggctacatcagggttgtaatgtatgaagggaagaaaatcatggca gactcaggaccaatctacgataaaacctatgctggtggtcggctaggattatttgtcttc tctcaagaaatggtgttcttctcagaccttaaatatgaatgcagagattcataa

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