Taeniopygia guttata (zebra finch): 100231310
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Entry
100231310 CDS
T01082
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100231310 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100231310 (IRF5)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100231310 (IRF5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100231310
NCBI-ProteinID:
XP_030117532
UniProt:
A0A674GHU1
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Position
1A:183741..188684
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AA seq
488 aa
AA seq
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MEPPRRVRLKPWLVAQVSSRRFPGLHWLDPEHRRFVIPWGHATRNPPGPQDHDTIFKAWA
QETGRFRAGDPPDPPRWKATLRCALNKSREFRLLLDGPRGSPAQPFRVYELCEETPGGAD
GGDEDNYGCSGEEDVSQLHKMTSLSIDDTKHGGDLLPPYPWPKEEAPPFANHCPPGGPFG
PPPPALLQGEAGGTHGTPELLPGAVAEMGPPLGPPGPSSACPVAPTEHLVPDLLVSPHML
PLTDLELKFQYRGRQVSALTVSNPHGCRLFHSSLEPTQEQEELFGPLTLEQVPFPAPDAI
PNEKQRFYTHQLLDVLDRGLILELQGQDLFALRLCQCKVFWTGPCAAPRPGPNPIQREKR
TKLFSLEGFLNGLIQFQKGQTPTPPPFEIFLCFGEEWPDQKPKEKKLITVQVVPVAARLL
LEMFSGELSWSADSIPLQISHPDLKDRMVEQFKELHQLWQSQQRLPPAQPPPGPSAGPWA
LPPGPLPH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagcccccgcgccgggtgcgcctcaagccctggctggtggcccaggtgagcagccgc
cgcttcccggggctgcactggctcgaccccgagcaccgccgcttcgtcatcccctgggga
cacgccaccaggaaccccccggggccccaggaccacgacaccatcttcaaggcgtgggcg
caggagacgggccggttccgggccggggacccgccggacccgccgcgctggaaggccacg
ctgcgctgcgccctcaacaagagccgcgagttccggctgctgctggacgggccccgcggc
tccccggcccagcccttccgcgtgtacgagctctgcgaggagacccccgggggcgcagat
gggggggacgaggataactatggctgcagtggggaagaagacgtcagccagctccacaag
atgacatccctgagcatcgatgacacgaagcacgggggggacctgctgcccccctacccc
tggcccaaggaggaggctcctccctttgccaaccactgccccccgggggggcccttcggg
cctccccccccggcactgctccagggggaggcagggggcacccacgggacccctgagctg
ctccccggggccgttgccgagatggggccccccctgggccccccggggccctcgtccgcc
tgcccggtggcaccgacagagcacctggtccccgacctgctggtcagcccgcacatgctg
ccactgactgacctggagctgaagttccagtaccggggccgccaggtgagcgccctgacc
gtcagcaacccccacggctgccggctgttccacagcagcctggagcccacgcaggagcag
gaggagctcttcgggcccctgacgctggagcaggtgcccttccctgctcccgacgccatc
cccaacgagaagcagcgcttctacacccaccagctgctggacgtgctggaccgagggctc
atcctggagctccagggccaggacctctttgccctccggctctgccagtgcaaggtcttc
tggacagggccctgtgccgctccccggcccggccccaaccccatccagagggagaaaagg
accaagctcttcagcctcgagggcttcctcaacggcctgatccagttccagaaggggcag
acgcccacgccgcccccctttgagatcttcctctgcttcggcgaggagtggccggaccag
aagcccaaggagaagaagctgatcacggtgcaggtggtgccggtggcggcgcggctgctg
ctggagatgttctccggggagctctcctggtcggccgacagcatcccgctgcagatctct
caccccgacctcaaggacaggatggtggagcagttcaaggagctgcaccagctctggcag
agccagcagcggctgccgccggcgcagcccccacccggcccctccgcggggccctgggcg
ctgccccccgggcccctgccccactga
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integrated database retrieval system
