Taeniopygia guttata (zebra finch): 100231620
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Entry
100231620 CDS
T01082
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X2
KO
K12173
BRCA1-A complex subunit BRE
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100231620 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100231620 (BABAM2)
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231620 (BABAM2)
03400 DNA repair and recombination proteins [BR:
tgu03400
]
100231620 (BABAM2)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100231620 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
100231620 (BABAM2)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
100231620 (BABAM2)
DNA repair and recombination proteins [BR:
tgu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100231620 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
100231620
NCBI-ProteinID:
XP_030125056
Ensembl:
ENSTGUG00000002543
LinkDB
All DBs
Position
3:complement(104422190..104583337)
Genome browser
AA seq
383 aa
AA seq
DB search
MSPEVALNRISPALSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPSCDRFKLHI
PYAGETLKWDIIFNAHYPDLPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDVNEDPGEDVALLSVSFEDAEATQVFPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKTYFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgaagtggccttgaacagaatttctccagcactttcacccttcatttccagt
gtggtcaggaatggaaaagtaggactagatgctactaattgcttacggattacagacttg
aagtctggctgtacatccttgacccctggacccagctgtgatcgttttaaactacatatc
ccttatgcaggagaaacactcaaatgggatataatttttaatgctcactatcctgaccta
ccaccagattttatctttggagaggatgctgagtttttgccagatccttctgccttgcat
aatttagcttcctggaatccttcaaaccctgaatgcctcctgcttgttgtgaaagagctt
gtgcagcagtatcaccaatttcagtgcagccgattacgggagagctctcgcctcatgttt
gagtatcagactttacttgaagagccccagtatggagaaaacatggaaatctatgctggc
aaaaaaaacaactggactggagaattctcggctcgcttcctcttgaagttgcctgttgat
ttcagcaatattcctacataccttctcaaggatgtgaacgaagaccccggagaagatgtt
gcacttctctccgttagttttgaggatgcagaagctactcaggtttttcctaagctgtac
ctctcccctcgtattgaacatgcgcttggaggatcctctgcccttcacatcccagccttt
cctggtggaggttgtctcatcgactatgtaccccaagtatgccagctcctaactaacaag
gtacaatatgttattcagggataccataagcgaagagagtacattgcagctttcctgagt
catttcggaactggtgtggtggaatatgatgcagaaggattcacaaagcttactctgttg
ctgatgtggaaagatttttgcttccttgttcacattgacctacccctctactttcctcga
gaccaaccgaccctaacatttcagtctgtctaccacttcactaacagtggccagctgtac
tctcaggcccagaagaattacccctacagcccccgatgggatggcaatgaaatggccaag
agagcaaagacatatttcaagacatttgtccctcagttccaggaggcagcatttgctaat
gggaagctttag
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