Taeniopygia guttata (zebra finch): 100231651
Help
Entry
100231651 CDS
T01082
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu00310
Lysine degradation
tgu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100231651 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tgu03036
]
100231651 (SETDB1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100231651 (SETDB1)
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100231651 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100231651 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
YkyA
Motif
Other DBs
NCBI-GeneID:
100231651
NCBI-ProteinID:
XP_030147081
LinkDB
All DBs
Position
25:1973325..1988482
Genome browser
AA seq
1279 aa
AA seq
DB search
MDSQDMQEVMEEMGISMEELQEIIDKEVENSEWVRQWKQQLEELEQCMRHKEEEVAHVDQ
LIDDAMRAMDKCETLAKELYSMMGLRYRDSSSEDEAPAATEVIEIPDEEDDDVMSVDSGW
RRSSSSPRISRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQESPGTA
QPISVPAAPSNDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGVGKKYKVKFDNKGK
SLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNVKNKDRFLIFFDD
GYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWE
GTWWKSRVEEVDGSLVKILFLEALPMGTASVSFSFPQEDKRCEWIYRGSTRLEPMFSMKT
STASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGTGPQYKTPEPAARPTSLQPAEM
ECSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPVAGRTLPAPQHRVPSSGP
SQPFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYACLSRVRPMRSDQYRSRNPLLIPLLYD
FRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCLDPYVLVD
RKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLV
GCDCKDGCRDKSRCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKC
NVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGL
EMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDDDENTGTEELEESNEDS
SDDNFCKDENFSTSSVLRSYATRRQTRGQRDHGPSETASKDSGPARPLGHDEPATAPPCK
LPVSEEIAKNKVASWLSSNSVAEGFQDSESSSFRMGEGGEAKALKMEIPAEREKGCASTS
GDLNGETKAAKKEEPEEPTKTPGLSSLGRRYGYNPCPPRLEGIRRPVSGTVLLQSRRRSL
ALPPSSENVLMVSSSTDSDEEHRAGQAPGTANDSDDIQTISSGSEEEEGEDKKNPSSGSG
PVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEENCYIIDA
KLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSV
EGKELLCCCGAIDCRGRLL
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggacatgcaggaggtgatggaggagatgggaatctccatggaggagctc
caggaaatcatcgacaaggaggtggagaactcggagtgggtgaggcagtggaagcagcag
ctggaggagctggagcagtgcatgaggcacaaggaggaggaggtggcccacgttgaccag
ctcattgacgatgccatgagggccatggacaagtgcgagacgctggccaaggagctgtac
tccatgatgggcctgcgctaccgggacagcagctcggaggacgaggcgccggcggccacc
gaagtgatcgagatcccggacgaggaggacgacgacgtcatgagcgtggactcgggttgg
aggcgcagcagcagcagtcccagaatctccagggatcagagtctgctgcgggaagcaatg
gctgccatgaggaaatctgcccgggatgttgcaaaattcatggatgctgtaaacaagaaa
accaacttgcaggaagcacagaaagatgcacaaccccctcaggaatctcctggcactgcc
cagcccatcagtgtccctgcagcccctagcaatgatctcaacactgatggggacctcaaa
gtgggcatgaggattttggggaaaaaaagaaccaagacgtggcacaaggggacgttgatt
gccatccagacggtcggtgttggcaagaaatacaaagtgaaatttgataataaagggaag
agtttgctctcgggcaaccacattgcctacgattaccacccgtctgccgagaggcaccac
gtgggcaggagggtggtggccaggtacaaggatggcaatcagatgtggctctatgctggg
atcgtggctgagacccccaacgtgaagaataaagacaggttcctgatcttctttgacgac
ggctacgcgtcgtacgtgaaggagtgggagctgtacccggtctgccggccactgaaaaag
gcctgggaagacattgaggatgtttcctgtcgggatttcattgaggagtacatcactgcc
tatcccaaccggcccatggtactgctgaagaatgggcagctgatcaaaactgagtgggaa
gggacctggtggaaatccagagtggaagaagtggatggaagtctggtgaaaatccttttc
ctggaagctcttcccatgggaactgcaagtgtttccttctcgttcccacaagaggacaaa
cgttgtgagtggatttaccgaggttccacacgcctcgagcccatgttcagcatgaaaact
tccacagcttccacccaggaaaagaagcaaagtggacaaaccaggactcgtcccaacgtt
ggtgctgtgaggagcaagggccctgtggtccagtacacccaggatttagcaggaactggt
ccccagtacaagactccagagccagctgcacgtcccacatctcttcagcctgcggagatg
gagtgctccgacacccagctggcccagggcagaaagcaggtggccaagaaaagcacttcc
ttccgtcctggctccgtgggctctgggcactcatccccgtcctcccctgtcctcggggac
accccggtggccgggaggacgctcccagccccgcagcaccgcgtccccagcagcggcccc
tctcagcccttccacgggatgatggaccgcgttcccaacgagccgtcgtaccgcgccccg
ctggagaagctgttctacctgccgcacgtgtgcagctacgcctgcctgtcgcgggtgcgg
cccatgcgcagcgaccagtaccgcagccggaacccgctgctcatcccgctgctctacgac
ttccgccgcatgacggcgcggcgccgcgtcaaccgcaagatgggcttccacgtgctctac
aaaacgccctgcgggctctgcctgcgctccatgcacgagatcgagcgctacctcttcgag
acggactgcgacttcctcttcctggagatgttctgcctggatccctacgtgctggtggac
cgcaagttccagccctacaagccctactactacatcgccgacatcaccaagggcaaggag
gacgtgcccctgtcgtgcgtcaacgagatcgacaacacgccgcccccgcaggtggcctac
agcaaggagcggatccccgggaaaggggtgtacatcaacaccagctgggagttcctcgtg
ggctgtgactgcaaggacggctgcagggacaaatccaggtgtgcctgtcaccagctgacc
atccaggccagcggctgcacccctggagggcaaatcaaccccaactcaggctaccagcac
aagcggctggaggaatgtctcccaacaggcgtctacgagtgcaacaagaggtgcaagtgc
aacgtgaacatgtgcaccaaccgcctggtccagcacggcctccaggtgcggctgcagctc
ttcaagacccagaacaaaggttggggcattcgctgcctcgacgacatcgccaagggctcc
tttgtctgcatctacgcagggaaaatcctcacggacgactttgctgacaaagaggggctg
gagatgggtgacgagtactttgccaacctggaccacatcgagagcgtggagaacttcaag
gagggctacgagagcgacgccaagtgctcctcggacaacagcggcgtggacctcaaggac
gacgacgacgacgacgagaacacgggcacggaggagctggaggaatccaacgaggacagc
tccgacgacaacttctgcaaggacgagaacttcagcacgagctcggtgctgcgcagctac
gccacgcgccggcagacgcgcggccagcgcgaccacggcccgtccgagacggcctccaag
gactcggggccagcgcggcccctcggccacgacgagcccgccacggccccgccctgcaag
ctgcccgtgtccgaggagatcgccaagaacaaagtggcctcgtggctgagctccaacagc
gtggccgagggcttccaggacagcgaatcctcctccttcaggatgggcgaaggaggagaa
gccaaggctctgaagatggagatccctgcagagagggagaagggctgtgcttccacatcg
ggagatctgaacggagagaccaaggcagccaagaaggaggaacctgaagaaccaaccaaa
actcctgggctgagcagcttgggaaggaggtatggctacaacccctgcccgcccaggctg
gagggcatccgcaggccggtgagtgggacggtgctgctgcagagccgccggcggtccctg
gccctgccgccctcctccgagaatgtgctgatggtgtcgagcagcaccgacagcgacgag
gagcacagggcagggcaggccccgggcacagccaacgacagcgacgacatccagaccatt
tcctcaggatccgaggaggaggaaggggaggacaagaagaatccatcatctgggtcaggt
cccgtgaagagacaagtggctgtgaaatccacccgaggcttcgccctcaagtccacccac
ggcatcgccatcaaatccacgccgctggcggcggccgacaagggcgagagcgcggggccc
gtgcgccgcagcacgcggcagttctacgacggggaggagaactgctacatcatcgacgcc
aagctcgagggcaacctgggccgctacctcaaccacagctgcaccccaaacctcttcgtg
cagaacgtcttcgtggacacccatgaccttcgcttcccctgggtcgccttcttcgccagc
aagcggatccgagcgggcacggagctgacctgggattacaactacgaggtcggcagcgtg
gagggcaaggagctgctgtgctgctgcggggccatcgactgccggggccggctgctctga
DBGET
integrated database retrieval system
