Taeniopygia guttata (zebra finch): 115496608
Help
Entry
115496608 CDS
T01082
Name
(RefSeq) actin, cytoplasmic type 5
KO
K05692
actin beta/gamma 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03082
ATP-dependent chromatin remodeling
tgu04145
Phagosome
tgu04210
Apoptosis
tgu04510
Focal adhesion
tgu04520
Adherens junction
tgu04530
Tight junction
tgu04810
Regulation of actin cytoskeleton
tgu04814
Motor proteins
tgu04820
Cytoskeleton in muscle cells
tgu05100
Bacterial invasion of epithelial cells
tgu05132
Salmonella infection
tgu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115496608
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115496608
09143 Cell growth and death
04210 Apoptosis
115496608
09144 Cellular community - eukaryotes
04510 Focal adhesion
115496608
04520 Adherens junction
115496608
04530 Tight junction
115496608
09142 Cell motility
04814 Motor proteins
115496608
04820 Cytoskeleton in muscle cells
115496608
04810 Regulation of actin cytoskeleton
115496608
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
115496608
09171 Infectious disease: bacterial
05132 Salmonella infection
115496608
05100 Bacterial invasion of epithelial cells
115496608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
115496608
03019 Messenger RNA biogenesis [BR:
tgu03019
]
115496608
03036 Chromosome and associated proteins [BR:
tgu03036
]
115496608
03029 Mitochondrial biogenesis [BR:
tgu03029
]
115496608
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tgu04812
]
115496608
04147 Exosome [BR:
tgu04147
]
115496608
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115496608
Messenger RNA biogenesis [BR:
tgu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
115496608
Chromosome and associated proteins [BR:
tgu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115496608
NuA4 complex
115496608
Chromatin remodeling factors
BAF complex
115496608
PBAF complex
115496608
GBAF(ncBAF) complex
115496608
SWR1 complex
115496608
Mitochondrial biogenesis [BR:
tgu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
115496608
Cytoskeleton proteins [BR:
tgu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
115496608
Exosome [BR:
tgu04147
]
Exosomal proteins
Proteins found in most exosomes
115496608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
115496608
NCBI-ProteinID:
XP_030137218
LinkDB
All DBs
Position
10:2204030..2207006
Genome browser
AA seq
376 aa
AA seq
DB search
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagatcgctgccctggtggtggacaacggctcggggatgtgcaaggcc
ggcttcgcgggcgacgacgcgccccgcgccgtcttcccctccatcgtgggccggccgcgg
caccagggcgtcatggtgggcatggggcagaaggacagctacgtgggggacgaggcgcag
agcaagaggggcatcctcaccctcaagtaccccatcgagcacggcatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggcgcccgag
gagcacccggtgctgctcacagaggcgcccctcaaccctaaagccaacagggagaagatg
acgcagatcatgttcgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtccctctacgcctcgggccgcaccacgggcatcgtgatggactccggcgacggcgtc
acccacacggtgcccatctacgagggctacgccctgccccacgccatcctgcgcctggac
ctggccggccgcgacctcaccgactacctcatgaagatcctcaccgagcgcggctacagc
ttcaccaccacggccgagcgcgagatcgtgcgcgacatcaaggagaagctgtgctacgtg
gcgctggacttcgagcaggagatggccacggccgcctcctcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtcatcaccatcggcaacgagcgcttccgctgccccgag
tccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatcaggaaggacctgtacgccaacaccgtgctc
tcggggggcaccaccatgtacccgggcatcgccgaccgcatgcagaaggagatcacggcg
ctggcgcccagcaccatgaagatcaagatcatcgccccgcccgagcgcaagtactccgtg
tggatcggcggctccatcctggcctcgctctccaccttccagcagatgtggatcagcaag
caggagtacgacgagtccggcccctccatcgtgcaccgcaaatgcttctag
DBGET
integrated database retrieval system