KEGG   Taeniopygia guttata (zebra finch): 115496608
Entry
115496608         CDS       T01082                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu03082  ATP-dependent chromatin remodeling
tgu04145  Phagosome
tgu04210  Apoptosis
tgu04510  Focal adhesion
tgu04520  Adherens junction
tgu04530  Tight junction
tgu04810  Regulation of actin cytoskeleton
tgu04814  Motor proteins
tgu04820  Cytoskeleton in muscle cells
tgu05100  Bacterial invasion of epithelial cells
tgu05132  Salmonella infection
tgu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    115496608
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115496608
  09143 Cell growth and death
   04210 Apoptosis
    115496608
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115496608
   04520 Adherens junction
    115496608
   04530 Tight junction
    115496608
  09142 Cell motility
   04814 Motor proteins
    115496608
   04820 Cytoskeleton in muscle cells
    115496608
   04810 Regulation of actin cytoskeleton
    115496608
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    115496608
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115496608
   05100 Bacterial invasion of epithelial cells
    115496608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tgu03021]
    115496608
   03019 Messenger RNA biogenesis [BR:tgu03019]
    115496608
   03036 Chromosome and associated proteins [BR:tgu03036]
    115496608
   03029 Mitochondrial biogenesis [BR:tgu03029]
    115496608
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tgu04812]
    115496608
   04147 Exosome [BR:tgu04147]
    115496608
Transcription machinery [BR:tgu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     115496608
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     115496608
Chromosome and associated proteins [BR:tgu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     115496608
    NuA4 complex
     115496608
  Chromatin remodeling factors
   BAF complex
    115496608
   PBAF complex
    115496608
   GBAF(ncBAF) complex
    115496608
   SWR1 complex
    115496608
Mitochondrial biogenesis [BR:tgu03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    115496608
Cytoskeleton proteins [BR:tgu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     115496608
Exosome [BR:tgu04147]
 Exosomal proteins
  Proteins found in most exosomes
   115496608
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 115496608
NCBI-ProteinID: XP_030137218
LinkDB
Position
10:2204030..2207006
AA seq 376 aa
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPESIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcggacgaggagatcgctgccctggtggtggacaacggctcggggatgtgcaaggcc
ggcttcgcgggcgacgacgcgccccgcgccgtcttcccctccatcgtgggccggccgcgg
caccagggcgtcatggtgggcatggggcagaaggacagctacgtgggggacgaggcgcag
agcaagaggggcatcctcaccctcaagtaccccatcgagcacggcatcgtcaccaactgg
gacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggcgcccgag
gagcacccggtgctgctcacagaggcgcccctcaaccctaaagccaacagggagaagatg
acgcagatcatgttcgagaccttcaacaccccggccatgtacgtggccatccaggccgtg
ctgtccctctacgcctcgggccgcaccacgggcatcgtgatggactccggcgacggcgtc
acccacacggtgcccatctacgagggctacgccctgccccacgccatcctgcgcctggac
ctggccggccgcgacctcaccgactacctcatgaagatcctcaccgagcgcggctacagc
ttcaccaccacggccgagcgcgagatcgtgcgcgacatcaaggagaagctgtgctacgtg
gcgctggacttcgagcaggagatggccacggccgcctcctcctcctcgctggagaagagc
tacgagctgcccgacgggcaggtcatcaccatcggcaacgagcgcttccgctgccccgag
tccatcttccagccctccttcctgggcatggagtcctgcggcatccacgagaccaccttc
aactccatcatgaagtgcgacgtggacatcaggaaggacctgtacgccaacaccgtgctc
tcggggggcaccaccatgtacccgggcatcgccgaccgcatgcagaaggagatcacggcg
ctggcgcccagcaccatgaagatcaagatcatcgccccgcccgagcgcaagtactccgtg
tggatcggcggctccatcctggcctcgctctccaccttccagcagatgtggatcagcaag
caggagtacgacgagtccggcccctccatcgtgcaccgcaaatgcttctag

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