Thalassotalea sp. LPB0316: LP316_06560
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Entry
LP316_06560 CDS
T08426
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab01501
beta-Lactam resistance
thab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LP316_06560
01503 Cationic antimicrobial peptide (CAMP) resistance
LP316_06560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thab02000
]
LP316_06560
01504 Antimicrobial resistance genes [BR:
thab01504
]
LP316_06560
Transporters [BR:
thab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LP316_06560
Antimicrobial resistance genes [BR:
thab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LP316_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QOL26948
UniProt:
A0A7L9S9I0
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All DBs
Position
1491780..1494866
Genome browser
AA seq
1028 aa
AA seq
DB search
MILSDLSVKRPVFATVINLLLVTFGIVAFFFLPLREYPDINPPVVSINTAYPGASAAIVE
TKITQVLEDRISGVEGVKNITSNSRVGRSNITIEFELDRDIDAATNDVRDRISRALRQMP
EQADPPQVFKANDDESVIVWFVLQSESLSTLELTDYANRYIVDRFSVVDGVAQVRVGGGR
TYAMKVFLDKARMAARGVTVDDVESTLRSENIELPAGEIESIDRDFSIRVERSFLTAEDF
ANLVIARSNDNTLVRLSDVARVEVSAEDDENMFKGNGKNMVGLGIIKQSKANTLEVVKAA
RSEMEKIREGLPMGTQILNSYDSSVFIQGSIDEVYNTLFIAMLMVVLVIFLFLGNIRATF
IPAVTVPVALIGSLIVLSSLDFSINLLTLLALVLAIGLVVDDAIVVLENIYRRIEAGQTP
LMAAYQGGREVAFAVVATTLVLVAVFVPLVFLSGNIGRLFTEFALAIAAAVVFSSFTALS
LTPMMCSKLLRRKERTSSFGQLLDRGFAKLEEKYKNSLRYTIKQPLMLVVVVALALFATF
SLVNKLPSEYTPKEDRGNMFVIMQGAEGASYENNVKNMNQIEGMLLEYLERGDLDRVITR
VPGFGGTGGIAIIGLPDWGERNISTFEFAARFNRELASVTDVRAFAIMRRGIGGGGNSQP
VEFVLQGNTYEELAKWRDIVIAKAQENPNLLSVNSDYKETFPQLLVQIDQNRAYDLGVPV
GDIAKTLETMLGQRRVTTYVERGEEYDVILEGFKEDYKSPQDIDNIYVRSRKSGELIPLA
NLLTIKENATSSQLNRYNRLRSVTITANLAPGYALGDALAYLNQVVDENLPSDAQVDYKG
QSLLLKESGNSIAFVFLLALLITFLVLSAQFESFIHPFVILLTVPLALVGALMGLELMGM
SLNIYSQIGIVMLIGLAAKNGILIVEFANQLRDKGISFEEALLQASQQRLRPIVMTTFTT
VTSAIPLVLATGPGAESRMVIGVVIFAGVSVASIFTLFVVPGAYYWLCRNTGSPEAIAKQ
IAKEEQAQ
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
gtgattttatctgatttgtcggtaaaacgccctgtttttgccaccgttattaatctcttg
ttggtgacctttggtattgtcgcatttttctttttaccgctgcgagaatatccggatatt
aacccgccagtcgtaagtattaatactgcttatcccggggcgagtgcggcgattgtcgaa
acgaaaattacccaggttcttgaggatcgcatcagtggggtagaaggggtaaaaaacatc
acctcaaattcacgtgttggtcgctcaaatattacgatagagtttgagttagaccgcgat
atcgacgcggcaactaacgacgttcgtgaccgcatctcaagggcgttgcgacaaatgcct
gagcaggcagaccctcctcaagtctttaaagccaatgatgacgaaagcgttattgtttgg
ttcgttttacaatctgaatcgctctcaacactcgagctgactgattacgccaaccgctat
atcgttgatcgcttttccgtggttgatggtgttgctcaagtgcgcgttggtggtggtcga
acctatgcgatgaaggtgtttttagataaagcgcgcatggcggcacggggtgtaaccgtc
gatgacgttgaaagcacattgcgctctgaaaatattgaattgccggccggtgaaatagag
tcgatagatcgcgatttttcaattcgcgttgagcgcagtttccttaccgctgaagatttt
gccaaccttgttattgcgcgctcaaatgacaacacgttagtgcgactttctgatgttgcg
cgggttgaagtgagcgccgaagacgacgagaacatgtttaaaggcaacggcaaaaacatg
gttggtctggggatcatcaagcaatcaaaagccaatactttagaggtggtcaaagcggcg
cgaagcgaaatggagaaaattcgcgaaggcctgccgatgggcactcagatcttaaatagt
tatgattcctcagtgtttattcaaggctcaatagatgaagtctacaataccttgtttatt
gccatgttaatggtggtgttggttatcttcttgttcttgggcaatatccgcgcaactttt
attcccgcggttaccgtacctgtagccttaattggttcgctgatcgtgttatctagctta
gatttttcaattaacttactgaccttgttagcgcttgttttagccattggcttggtcgtt
gatgacgcgatcgtcgtgttggaaaatatctaccgccgcattgaagccggtcaaacgcca
ttaatggcggcttatcaaggtggccgtgaagttgcctttgccgtagtggcaacgaccttg
gtgctagtcgctgtgtttgttcctttggttttcttatctggcaacattggccggctattt
actgaatttgctctcgctattgccgcagcggttgtgttttcaagttttactgcgttgtcg
ttaaccccgatgatgtgctctaaactcctcaggcgtaaagagcgtacgtcctcgtttggc
caactacttgaccgtggctttgccaagctagaagagaagtataaaaacagcttacgttat
acgataaaacaacctttgatgttggttgttgtcgttgctttagccttgtttgcaaccttt
tcactggttaacaaactgccttcagaatacacgcctaaagaagatcgcggcaatatgttt
gtcattatgcaaggcgctgaaggcgcgagttacgaaaacaacgttaaaaacatgaatcaa
atagagggcatgttacttgagtacctagagcgcggtgatttagatcgcgtgatcactcgt
gttcctggctttggcggtactggtggtattgctattattggtttacccgattggggtgag
cgcaatatttcaacctttgagtttgctgcccgttttaatcgtgagcttgcctcagtcacc
gatgtgcgcgccttcgctattatgcgccgaggcattggcgggggcggtaatagtcaaccc
gtagagtttgttttacagggcaatacttatgaggagttggccaagtggcgtgatattgtg
attgccaaggcacaagaaaacccgaacttgttaagtgttaatagtgactacaaggaaacc
ttcccacagctattggtgcaaattgatcaaaatcgcgcctacgacttaggtgtgccagtg
ggcgatatcgcaaaaacattggaaacgatgttagggcaacgccgcgttaccacctatgtt
gaacgcggtgaagaatacgatgttattttggaaggctttaaagaagactataagagcccg
caagatatcgacaatatttacgtgcgatcgcgtaaaagtggcgaattaattccgctggct
aatttattgaccatcaaagaaaatgcgacatcttcacaattaaatcgctacaaccgttta
cgcagtgtaacgattaccgccaaccttgcgccaggttatgcgttaggtgatgcattggcg
tacttgaatcaagtggtcgatgagaacttaccaagtgatgctcaggttgactacaaaggc
cagtcattgctattaaaagaatcgggtaactcaatcgccttcgttttcttattagcgtta
cttatcacctttttggtgttgtcagcacaatttgagagctttattcatccgtttgtcatt
ctgttaacggtgccattagcacttgttggcgccctgatggggttggagttgatggggatg
agcttaaatatctattcgcaaatcgggatagttatgctcattggtttagcagccaaaaat
ggtatcttgattgttgagtttgccaaccagctgcgcgataaaggcatatcctttgaagaa
gcactgcttcaagcctcacaacagcgtttgcgtccgatagtgatgacaacctttaccacc
gtaacaagtgctattccgctagtcttagcaactggcccaggcgctgagtcaaggatggta
ataggtgtggtaatttttgctggtgtatcagtggccagtatcttcactttattcgttgtg
ccaggtgcttactattggctgtgtcgaaataccggctcacctgaagctatcgcgaagcaa
atagcgaaagaagagcaagctcaatag
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