Thalassospira marina: CSC3H3_04965
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Entry
CSC3H3_04965 CDS
T05224
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
thac
Thalassospira marina
Pathway
thac01501
beta-Lactam resistance
thac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CSC3H3_04965
01503 Cationic antimicrobial peptide (CAMP) resistance
CSC3H3_04965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_04965
01504 Antimicrobial resistance genes [BR:
thac01504
]
CSC3H3_04965
Transporters [BR:
thac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CSC3H3_04965
Antimicrobial resistance genes [BR:
thac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CSC3H3_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AUG52147
LinkDB
All DBs
Position
1114816..1117962
Genome browser
AA seq
1048 aa
AA seq
DB search
MAKFFIDRPVFAWVIALVIMLAGGLSILQLPIEQYPSIAPPSVQVTATYPGASAQTVENT
VTQVIEQQMNGLDNLRYMSSTSDSTGRAQITLTFNSEADPDIAQVQVQNKLQAAMSVLPS
QVQQQGINVTKSSGSFLMVVGFVSSDGNIGSHDLADFVANTIKDPVSRVNGVGSVQVFGA
QHAMRVWLDPYKLISYGLSVSDVRTAIEDQNTEVSAGQIGGAPSVEGQQINATITAQSRL
QTPEEFSNILLRVNTDGSQVRLGDVARVEIGAESYNIVARYNGKDAVGIGINLATGANAL
DTAEAVKSRVAELQAYMPAGVEIVYPYDTTPFVKISIEEVVHTLVEAVVLVFLVMFLFLQ
NWRATLIPTIAVPVVLLGTFGVLAAFGYSINTLTMFGLVLAIGLLVDDAIVVVENVERVM
FEDGLSPRDATRKSMEQITGALIGIALVLSAVFIPMAFFSGSTGAIYRQFSITIVSAMVL
SVVVAIVLTPALCATLLKNAHHDPYSRKGFFGLFNRGFDKTNTFYQGSVGHVVQRKWRYL
TVYVLLVGALGYLFTQLPTSFLPDEDQGIMFSMVQLPAGASQERTLGVLKKVEGHFMNDE
KDNVNGIFTVAGFSFAGSGQNAGIAFVSLKDWSQRTEPQQAVKAIIGRAYGFFAQIKEGM
VFAFTPPAIVELGTANGFDMQLVDRGAVGHDALIAARNQLLGMAAQNPAVQGVRPNGLND
MPEFQVNIDQEKAKALGVSIGDINDTLSAAWGSSYVNDFMEKGRVKKVYIQADAKFRMMP
KDMDNWYVRNNQDEMVPISAFASTSWGYGSPRLERFSGLPSVNIQGQAAPGVSSGDAMNA
MADMVSKLPDGIGLEWTGLSYEERAAGDQAPALYALSVIVVFLCLAALYESWSIPVSVML
VVPLGVLGAVGAAMLRGLPDDVYFQVALLTTIGLSAKNAILIVEFARDLYEDGMGLLEAT
VEAARQRLRPIIMTSMAFTLGVLPLAISTGAGAAARVAVGTGVMGGMIAATVLAIFFVPL
FFMVIVGTFSRKDRQKKDKPVADDSPAL
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtttttcattgatcgcccggtatttgcctgggtgattgcccttgtgatcatg
ttggcgggggggctgtcgattctgcaattgccgatcgaacagtacccgtccattgcgccg
ccatcggtccaggtgacggcgacctatccgggggcgtcggcccaaaccgtggaaaacacg
gttacccaggtcatcgaacagcagatgaacgggcttgataacctgcgttatatgtcctcg
accagtgattccaccggccgcgcgcaaatcacgctgaccttcaattccgaagccgatcct
gacattgcccaggtccaggtgcagaacaaattgcaggctgcaatgtctgttctgccaagc
caggtgcagcagcagggcattaacgttaccaaatccagcgggtcgttcctgatggtggtt
ggtttcgtgtcttccgatggcaatatcggttcgcacgacctggccgacttcgttgccaat
accatcaaggacccggtttcgcgtgtgaacggcgttggcagtgtgcaggtttttggtgcg
cagcacgccatgcgcgtctggctggacccgtacaagctgatcagctatggcctgtcggtt
tccgatgtgcgcacagcgattgaggaccagaataccgaagtttccgccggtcagatcggc
ggtgccccgtcggttgaaggccagcagatcaacgccaccatcaccgcacaaagccgcctg
caaacgccggaagaattttccaacattcttttgcgcgtgaataccgatggttcgcaggtg
cgcctgggtgatgttgcccgcgttgaaattggtgctgaaagctacaacatcgttgcccgt
tataacggcaaggatgcggtgggtattggtatcaacctggcaaccggggcaaacgccctt
gataccgccgaggccgtcaaaagccgcgttgcggaactccaagcctatatgcctgccggt
gtcgaaattgtttatccttatgacaccacgcctttcgtgaagatctcgatcgaggaagtg
gtccacacccttgttgaagcggtggttctcgttttccttgtgatgttcctgttcctgcaa
aactggcgcgccacccttatcccgaccatcgccgttccggtggtgttgcttggtacattt
ggtgtgctggcagcgtttggctattccatcaacacgctgaccatgtttggtctggtgctt
gccatcggtcttctggtggacgatgccatcgttgttgtggaaaacgtcgaacgtgtgatg
tttgaagatggtctgtccccgcgtgatgcaacacgcaaatcaatggaacagatcacgggg
gctttgatcggtatcgcccttgtgctgtcggctgtgtttattccgatggcctttttctcc
ggttcgaccggggcgatttaccgccagttctcgatcaccattgtttcggcgatggttctt
tcggtggtcgttgcaatcgtgttgacaccggcattgtgcgcaacgctgcttaaaaatgcc
catcacgatccctattcgcgcaagggcttctttggcctgtttaaccgcggatttgacaaa
accaataccttctatcagggcagtgtcggccatgtggtgcagcgcaaatggcgttacctc
acggtttatgtcctgcttgttggagctcttggctatctctttacccagcttccgacctcg
ttcctgcctgatgaagaccagggcatcatgttctcgatggtgcagttgcctgccggtgct
tcgcaggaacggacccttggcgttctgaaaaaggtcgaaggccatttcatgaatgacgaa
aaggacaatgtgaacggcatctttaccgtggcgggcttcagcttcgccggtagcggtcag
aatgccggtattgccttcgtcagcctcaaggactggtcgcagcgtaccgaaccgcaacag
gcggtcaaggcgatcatcgggcgtgcctatggtttctttgcccagatcaaggaaggcatg
gtctttgcctttaccccgccggcaattgtcgaactggggacggcaaacggctttgacatg
cagcttgttgaccgtggtgccgtgggccacgatgccctgattgcagcacgtaaccagttg
ctgggcatggccgcacaaaacccggcagtgcagggtgtgcgcccgaacggcctgaatgac
atgcccgaattccaggtcaatatcgaccaggaaaaggcaaaggcactgggtgtatcgatt
ggcgatatcaacgatacgctgtcggctgcctgggggtcgagctatgtcaacgacttcatg
gaaaaaggccgcgttaaaaaggtctatatccaggctgatgcgaaattccgcatgatgccc
aaggacatggacaactggtatgtgcgtaacaaccaggacgaaatggtgccgatttcggca
tttgcctccacctcctgggggtatggttcgccgcgtcttgaacgtttcagcggtttgccc
tctgtcaatattcaggggcaggcggcaccgggtgtcagctcgggtgatgcgatgaatgcc
atggccgatatggtgtccaagctgcccgatggtatcgggctggaatggacgggcctttcc
tacgaagaacgtgccgcgggtgaccaggcaccggccctttatgccctgtcggtcattgtc
gtgttcctgtgtcttgctgccctttacgaaagctggtcaatcccggtttccgtgatgctg
gtggtgccgctgggtgttttgggtgccgtgggtgccgccatgctgcgtggcctgccggac
gacgtttacttccaggtggccctgcttacgaccattggtttgtcggcgaaaaacgccatt
ctgattgtcgagttcgcccgcgatctttacgaagacgggatggggctgcttgaggcaacc
gtcgaagctgcccgtcagcgtctgcgtccgatcatcatgacctcgatggcctttaccctt
ggcgttctgccccttgcgatcagcacgggtgcaggggcggcggcccgtgtggccgtgggt
actggcgtgatgggcggtatgatcgcggcaacggttctggcgatctttttcgtgccgctg
ttctttatggtgattgtcggcaccttcagccgcaaggatcgccagaaaaaggacaaaccg
gtcgctgatgacagcccggccctgtaa
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