Thalassospira sp. B30-1: IT971_04760
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Entry
IT971_04760 CDS
T11046
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thad Thalassospira sp. B30-1
Pathway
thad01501
beta-Lactam resistance
thad01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thad00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IT971_04760
01503 Cationic antimicrobial peptide (CAMP) resistance
IT971_04760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thad03036
]
IT971_04760
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thad02000
]
IT971_04760
01504 Antimicrobial resistance genes [BR:
thad01504
]
IT971_04760
Chromosome and associated proteins [BR:
thad03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IT971_04760
Transporters [BR:
thad02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IT971_04760
Antimicrobial resistance genes [BR:
thad01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IT971_04760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
YknX_C
RND-MFP_C
BSH_CusB
HH_EMRA
Beta-barrel_RND_2
BSH_CzcB
BSH_YhbJ
HH_YBHG
HH_AAEA_pHBA
ECSIT_C
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QPL37965
LinkDB
All DBs
Position
1031686..1032876
Genome browser
AA seq
396 aa
AA seq
DB search
MRSCLKLAGVAVLALMVAACDEQKEAQQSDASAQQQPQATPVGTVTLEAQTVGLIEEMPG
RTVAFRKAAVRPQVDGIIKERNFTEGAFVEAGQQLYMIDQAVYMAELDAAQAELAKQRAT
LDQTTKTRKRYESLVKTQAVSEQTFDDAISAEAQAKAAVAAARAQVDQARINVEYTTVTA
PISGQISSSDVTEGALVTANQTEALTTITQLDPIYVDVTQAGGRLMKIKQAIQNGRIQGV
ENGKIEVALIIDATGVEYPHTGTLQFSDVSVNETTGTIRLRAVFPNPDGVLLPGMFVRGQ
VRQGKLDGAFLVPQKAVMRRPDGTAYVYTIGDGKVVSKDIQIEQSQGENWVVTDGVSDGE
QLIVDGIQRIAPGAPVTAQPVENANAGQGAAQGSAQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttgtttgaaacttgcaggcgttgctgtgcttgcattgatggttgcggcctgt
gacgagcagaaagaagcgcaacagtcggatgccagcgcacagcagcaaccgcaggcaacg
ccggttggtaccgtgacacttgaagcgcagaccgttggtctgatcgaggaaatgccgggt
cgtaccgttgccttccgcaaggctgcggtgcgcccgcaggtcgatggtatcatcaaggaa
cgcaactttaccgaaggcgcgtttgttgaagccggtcagcagctttatatgattgatcag
gccgtttacatggcggaacttgacgcggcacaggcggagcttgccaagcagcgcgcgacc
cttgatcagacgaccaaaacccgcaagcgatacgaaagtcttgtgaaaacccaggcggtt
tccgagcagacctttgacgatgcgatttcggcagaagcccaggcaaaagccgcggttgcc
gccgcgcgtgcgcaggtcgatcaggcgcggatcaatgtggaatacaccaccgtaaccgcc
ccgatttccggccagatcagttcgtctgatgtgaccgaaggtgcgcttgtgaccgccaac
cagaccgaagcactgaccacgatcacccagcttgacccgatctatgtcgatgtgacgcag
gccggtggccggttaatgaagatcaagcaggcgatccagaacggccgcattcagggtgtt
gaaaacggcaagatcgaagttgccctgatcattgatgcgaccggtgttgaatatccccat
accgggacgttgcagttttccgacgtatcggtgaatgaaaccaccggaacgatccgtctg
cgcgcggttttcccgaacccggatggtgtgttgctgccgggcatgttcgtgcgtggacag
gtgcgtcagggcaagcttgatggggccttccttgtgccgcagaaagccgtgatgcgccgc
ccggatggcacggcatatgtttacaccatcggtgacggcaaggtcgtttccaaggatatc
cagatcgaacagtcgcaaggcgagaactgggtcgtgacagacggtgtttcggatggcgaa
cagctgatcgtcgatggcattcagcgtatcgcaccgggggcgccggtaacggcgcagcct
gtcgagaatgcgaatgctggccagggtgccgcccaaggttcagcccagtaa
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integrated database retrieval system
