Thauera sp. GDN1: CKCBHOJB_00507
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Entry
CKCBHOJB_00507 CDS
T09925
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
thag
Thauera sp. GDN1
Pathway
thag00270
Cysteine and methionine metabolism
thag00450
Selenocompound metabolism
thag01100
Metabolic pathways
thag01110
Biosynthesis of secondary metabolites
thag01230
Biosynthesis of amino acids
Module
thag_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
CKCBHOJB_00507 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CKCBHOJB_00507 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thag01007
]
CKCBHOJB_00507 (patB)
Enzymes [BR:
thag01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
CKCBHOJB_00507 (patB)
Amino acid related enzymes [BR:
thag01007
]
Aminotransferase (transaminase)
Class II
CKCBHOJB_00507 (patB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cdc6_lid
NIR_SIR_ferr
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WEN40973
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All DBs
Position
574124..575284
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AA seq
386 aa
AA seq
DB search
MTAPAFDFDRLIDRRALPSEKWGRYAGRDVLPLWVADMDFAAPPAVIDALRRRIDHGVFG
YTDAWPSLVEAVVDGLQRDHGWTIRPDWLVWLPGVVAGFNLACAIAGEPGDGVLTATPVY
PPFLTAPANTGRVLQRVELVLREGRWQWDWDALEATCTPSTRMLLLCSPHNPVGRVFDED
ELRRLADFAERHDLLVCSDEIHCGLVLDASRPHRPLAALDEAGARRTITLMAPSKTWNIP
ALYCAFAVIPDAALRRRYRHAMRGVVPHVNVLGMVAAEAAYRDGDAWRQALLAYLRGNRD
RVVEAIAALPGLAMTVPEATYLAWIDCRDMMAARGVNDPAAFFETAGVGLSDGAAFGAPG
FLRLNFGCPRATLDQALARMARALED
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccgccttcgatttcgaccgcctcatcgaccgtcgcgcgctgccgagcgaa
aagtggggccgctacgccggtcgcgacgtgctgccgctgtgggtggccgacatggatttc
gccgccccgcccgcggtcatcgacgctctgcgccggcgcatcgaccacggcgtgttcggc
tacaccgacgcctggccctcgctggtcgaggcggtggtcgacggcctgcagcgcgaccac
ggatggacgatacggcccgactggctggtgtggctgccgggcgtggtcgccggcttcaac
ctcgcctgcgcgatcgccggagagcccggcgacggcgtgctcaccgccacgcccgtctat
ccgcctttcctcaccgcccccgccaacaccggccgcgtgctccagcgcgtcgagctggtg
ctgcgcgagggccgctggcagtgggactgggacgcgctggaggcgacatgcacgccctcg
acccggatgctgctgctgtgcagcccgcacaacccggtcgggcgcgtgttcgacgaggac
gagctgcgccggctggcggatttcgccgaacgccacgacctgctcgtgtgttccgacgag
atccactgcggcctggtgctggacgcgtcgcgcccgcatcgtccgctcgccgcgctcgac
gaggccggcgcgcggcgcacgatcacgctgatggcgccgtccaagacctggaacatcccg
gcgctgtactgcgccttcgcggtgattcccgatgccgcgctgcgccgccgctaccgccac
gcgatgcgcggcgtcgtgccgcatgtgaacgtgctcggcatggtcgccgccgaggcggcc
taccgcgacggcgacgcctggcggcaggccttgctcgcctacctgcgcggcaaccgcgat
cgcgtcgtggaggccatcgccgcgctgccaggcctggcgatgacggttccggaagccacc
tacctggcctggatcgactgccgggacatgatggccgcacgcggtgtcaacgacccggcc
gccttcttcgagacggccggtgtcggcctgtcggacggtgcggcgttcggcgcgccgggc
ttcctgcgcctgaacttcggctgtccgcgcgcgaccctcgaccaggcgctggcgcgcatg
gcgcgcgcgctggaggactga
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