Thermobifida halotolerans: NI17_002940
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Entry
NI17_002940 CDS
T08032
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
thao
Thermobifida halotolerans
Pathway
thao00300
Lysine biosynthesis
thao00550
Peptidoglycan biosynthesis
thao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NI17_002940
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NI17_002940
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thao01011
]
NI17_002940
Enzymes [BR:
thao01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NI17_002940
Peptidoglycan biosynthesis and degradation proteins [BR:
thao01011
]
Precursor biosynthesis
Amino acid ligase
NI17_002940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
RraA-like
DUF1611
Motif
Other DBs
NCBI-ProteinID:
UOE20219
UniProt:
A0A399G5F8
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All DBs
Position
653975..655582
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AA seq
535 aa
AA seq
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MRPEHVQPRPLSELVPLLGPDAFVTCVDPAEPPLGTVPVPGGPDPEQARDLDAVVVTGIT
HDSRAVRPGDLYAALPGRRVHGAKFAEQAAKAGAAAVLTDPAGYDRAAATRLPVITVPDP
RAVLGDAAAWIYGNPSGELLLVGTTGTSGKTTVSYLVESGLRAAGMRTGLVGTVEMRVDD
ERVDSSLTTPEATDLHGLFALMREREVDGVAMEVSSHALALGRVDGVRYDVAVFTNLSQD
HLDFHADLRDYFDTKARLFTPEFARVAVVNRDDRFGRALVETVTERGAIPVTTFSAESDT
EADWYASDVVLEPEGSRFRVVGPGGMEMEASVRLPGPFNVSNAMAAIVALIEAGVPMPTA
LDGVAAARGVPGRMERIDEGQNFTAIVDYSHKPGAIEAVLTSLRSVTDGRLTIVVGCGGD
RDRGKRPLMGEAAARLADAVILTDDNPRSEDPVTIITSMLEGVAKVPVEQRARITVEPDR
HTAIEMAVERAKPGDVVVVAGKGHERGQYVGDRVLPFDDRAVLRDALRWRVGGEG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccgaacacgtccagccacgtccgttgtccgagctcgtcccgctgttggggccg
gacgccttcgtcacgtgcgtcgaccccgccgaacctccgctgggaaccgtgccggtcccc
gggggccccgatcccgaacaggcccgcgacctcgacgccgtcgtcgtcaccggcatcacg
cacgactcccgcgcggtgcgccccggagacctgtacgcggcgctgccgggacggcgcgtc
cacggcgccaagttcgccgagcaggccgccaaggcgggagccgcggccgtgctcaccgac
ccggccgggtacgaccgcgccgcggccacccgactgccggtcatcaccgtccccgacccg
cgcgccgtgctcggcgacgccgccgcctggatctacgggaacccctccggcgaactgctg
ctggtcggcaccaccgggaccagcggcaagaccacggtcagctacctggtggagtcggga
ctgcgcgcggcgggaatgcgcaccggactggtgggcaccgtggagatgcgggtggacgac
gaacgggtcgactcctccctcaccacccccgaggccaccgacctgcacgggctgttcgcc
ctcatgcgggagcgcgaggtcgacggcgtcgccatggaggtctccagccacgccctggcc
ctgggccgggtcgacggcgtgcgctacgacgtcgcggtgttcaccaacctctcccaggac
cacctggacttccacgcggacctgcgcgactacttcgacaccaaggcacggctgttcacc
cccgagttcgccagggtcgccgtggtcaaccgggacgacaggttcgggcgggcgctcgtc
gagacggtcaccgagcggggcgcgatcccggtcaccacgttctccgccgagagcgacacg
gaggcggactggtacgcctccgacgtcgtgctcgaaccggagggcagccggttccgggtg
gtcggccccggcgggatggagatggaggcctcggtgcggctgcccggacccttcaacgtc
tccaacgccatggccgcgatcgtcgccctcatcgaggcgggcgtcccgatgcccaccgcc
ctggacggggtggcggcggcccggggcgtgcccggccggatggagcggatcgacgagggg
cagaacttcaccgccatcgtcgactactcgcacaagcccggcgcgatcgaggcggtcctc
acctcgctgcggtcggtcaccgacggcagactcaccatcgtcgtgggctgcggcggcgac
cgcgaccggggaaaacgtcccctcatgggcgaggccgccgcccgcctcgccgacgcggtc
atcctcaccgacgacaacccccgcagcgaggacccggtcacgatcatcaccagcatgctc
gaaggcgtggccaaggtccccgtcgagcagcgcgcccgcatcacggtcgaacccgaccgg
cacaccgcgatcgagatggcggtggagcgcgccaaacccggtgacgtcgtcgtcgtggcc
ggtaaaggccacgagcgcggccagtacgtgggcgaccgggtgctgcccttcgacgaccgc
gcggtgctgcgggacgcgctgcgctggcgggtcggcggggagggctga
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