Thalassotalea sp. PS06: FNC98_03720
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Entry
FNC98_03720 CDS
T06100
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thap
Thalassotalea sp. PS06
Pathway
thap01501
beta-Lactam resistance
thap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FNC98_03720
01503 Cationic antimicrobial peptide (CAMP) resistance
FNC98_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thap03036
]
FNC98_03720
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thap02000
]
FNC98_03720
01504 Antimicrobial resistance genes [BR:
thap01504
]
FNC98_03720
Chromosome and associated proteins [BR:
thap03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FNC98_03720
Transporters [BR:
thap02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNC98_03720
Antimicrobial resistance genes [BR:
thap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FNC98_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF7461
V-SNARE
DUF3948
Motif
Other DBs
NCBI-ProteinID:
QDP00538
UniProt:
A0A516H9W0
LinkDB
All DBs
Position
850174..851253
Genome browser
AA seq
359 aa
AA seq
DB search
MENKSVSRLPLILLAVVLTALIVYLQWPEQSSERERRAHTVTVKTSPVIRAEFSDEFEAL
GTANANEQVIITAQYSDIVESIHFDDGDKVEKGDILVQLANTEEVAKVKELESDLAEAES
QLRRFNDLLARNVGSISQRDEQLSKTQSIRAQLKSAQAVLDNLTIRAPFSGQLGFRQVSV
GALVSNGEAITSLDDLDMIKVDFSVPERFLPTVSVGQTIKARNVAYPDELFRGTVTSIAS
RIDALTRTVKIRAQLPNYEGKLRPGMLMGITIKRKVEEIMQLPESAVIPFEDSHFVFVAD
QGVAKRKPVVIGRRKPGIVEIISGLDLAEDVVVEGALKLRDGAKVKIVNDNQATVKGGK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaatccgtttcacgtcttcctttaatcttattagctgttgttttaacagca
ttaattgtatatctgcaatggccagaacaaagttctgagcgagagcgccgcgctcacacc
gtcaccgtcaaaacgtctccggtaattcgcgctgaatttagcgacgagtttgaagcactg
ggtaccgcaaatgcgaatgagcaggtgattatcaccgctcagtattcagacatcgttgag
agtattcacttcgatgatggcgacaaggtagagaaaggcgatatattggtacagcttgcc
aatacagaagaagtggcgaaagtcaaagaacttgagtctgaccttgctgaagcagagtcg
caacttcggcgctttaatgatcttcttgcccgcaacgtgggcagtatttctcagcgtgat
gagcaattatcaaaaactcagtcaatccgggcgcagctaaaaagtgcccaggcggtatta
gataacctgactatcagggcgccttttagtggccagcttgggtttcgtcaggttagtgtc
ggcgctctggtcagcaatggtgaggccattacctcgttggatgatctggatatgattaaa
gtcgatttttcagttccggaacggttcttacctaccgtgtctgttggccagacgattaaa
gcgcgtaatgttgcctacccagacgaattatttcgcggcacggtaaccagtatcgcatcg
cgtatcgacgctctgacccgcacggtaaagatacgtgcacagctccctaattatgaaggg
aaattgcgcccgggaatgctgatggggattacaattaagcgcaaagtcgaagagattatg
cagctgcctgaaagtgccgtgatcccattcgaagatagtcatttcgtatttgtagcagac
caaggggttgcaaaacgcaagccggtagttatcggtcgtcgtaagccaggcattgttgaa
attatcagtggcctggatttagccgaggatgtcgtggttgaaggggctctgaagctccgt
gatggcgccaaggtcaaaattgtcaatgataaccaggctacggtgaaaggaggcaaataa
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