Thalassotalea sp. PS06: FNC98_05360
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Entry
FNC98_05360 CDS
T06100
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thap
Thalassotalea sp. PS06
Pathway
thap01501
beta-Lactam resistance
thap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FNC98_05360
01503 Cationic antimicrobial peptide (CAMP) resistance
FNC98_05360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thap02000
]
FNC98_05360
01504 Antimicrobial resistance genes [BR:
thap01504
]
FNC98_05360
Transporters [BR:
thap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FNC98_05360
Antimicrobial resistance genes [BR:
thap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FNC98_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDP00824
LinkDB
All DBs
Position
1226647..1230024
Genome browser
AA seq
1125 aa
AA seq
DB search
MNSHPIDNLVARALQGRIPLVIFFLSLVLGLLALKITPREEEPQIVVPMIDVSVLAPNLT
ANQVERQVTIPLEKLLSQISGIEHIYSTSMDGKLLVTLRFHVGEERQKAIVNTYNKLYSN
QDKLPVVVDKWQVKPQEVDDVPILMLGLYSTVPSLYDDFQLRRFAQEISTSLQQIDDTSE
INVVGGRQRALQIDLDIQALAARQTTVLDVVSAIDISNQLTRHGSLTLSHQQVVIESGDV
FRNVQQLQNMVVNIINGKPVLLKDVAKVTDGPQELKSYQWLQLTDSNSKTNDLALAQQAE
SLPLVTISVAKQKGSNAVSVSANVLQSMEEISQTILPEEVKFKLLRDYGQTANDKVNNLT
SSLAFAIFTVVVFIGVFLGWRPALVVGLAVPVCYGLTLMLDYMFGYTINRVTLFALILSL
GLLVDDPITGIDNIERTLKQAGRNASEKIVAAMQEIRPALLMSTLTIILAFIPLAFITGM
MGPYMAPMAFNVPVSVMISTLVAFLVTPWLAKKFLRTEKTSQTKSAQSEHAASESAITES
ALTQTGTSLYRRILNPILERRGRIKLGLVAVLILFIASASLPIFRAVPLKLLPFDNKNEI
QVLLDLPEGASLEQTAALAQKVSTIAQSLPEVEALAVYVGESSPIDFNGLVRGYYQRQGQ
HLGDIRVVLIDKEERQHQSHGVVLRLRQLLAPLQTDDISIKVVEVPPGPPVMSTLVTEVY
AEPLVDKDIHYQAANKVKARLEQEAHVVEVDSSMIASQQISRFVIDKQKAALSGISTQEV
NQALAIAVDGSFAGVYQQPFDAQPIPIKVKLPFEIRQDLSHISAMQLKGRMGIAQQNQGL
GLENAPQPIVPLAELGTWQTKSVSQPIMRKDLRPVIYVTAELSGRTPAEVIADISSDFNQ
PEAAGKDWQQRTFLSSGAGLGWSLPDGTSYSFSGEGEWRITIDVFRDMGIAFAFALTGIF
IVLKWQTQSTALSLIIMSAIPLTIIGIMPGFFLMNQFGERVIAGAPEPVLFTATAMIGMI
ALAGIVVRNSLILVEFISQARAAGASIKEAILTAGEVRMRPVLLTAGTTLLGNLIITLDP
VFNGLALAIIFGIIASTLFSLLVVPMVYFLVFDKDSNPEGISIND
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcatccgatcgataacctggtagccagggcgctacaggggagaattccgctg
gtgatatttttcctgtcactggtacttgggttattagctcttaagatcacacctcgtgaa
gaagaaccgcagatagtggttccaatgattgatgtctccgtgcttgcgccaaacttaacg
gcgaaccaggtagagcgacaggtcaccattcctctggaaaaactgttatcgcaaatttcc
ggaatcgaacacatttattcgacctccatggatggcaagttactggtaaccttgcgtttt
cacgttggtgaagaaagacaaaaagcgatagtaaatacttacaataagctctactccaac
caggacaagcttcccgttgtcgtcgacaaatggcaggttaaacctcaggaagtggatgat
gtgccgatattaatgctcggattgtatagcactgttccctctctttatgacgattttcaa
ttacgtcgatttgcccaggaaatatctacttcattgcaacaaatcgatgataccagtgag
attaacgttgttggcggccggcaacgggcattgcaaattgatctcgacattcaggcgctt
gctgcccgacaaaccaccgtactcgatgttgtcagtgccattgatatttccaatcaactg
actcgccacggttctctaaccctttctcatcagcaggttgttattgagtctggtgacgta
tttcgtaatgtccaacagttgcaaaatatggtggtgaatatcatcaatggcaaacctgtg
ctgctcaaagatgtggcaaaagtgactgatggaccgcaagagttaaaatcttatcagtgg
ttgcaactaaccgacagtaacagcaaaaccaacgaccttgcactcgcgcagcaggcagaa
tccttacccctggtaaccattagtgtcgccaaacaaaaaggcagtaatgcggtatcggtt
agtgccaatgtactgcagtctatggaagagataagtcaaaccatcttgcctgaagaagtt
aaattcaagctgttaagagattatggccaaaccgctaatgataaagtgaacaatcttaca
tcatcgttggcttttgcgatatttaccgtggtggtatttattggcgtgttcctcggctgg
cgtccggcactcgtcgttggtctggcggtgcctgtatgttatgggctgacattgatgctc
gattacatgttcggttacaccattaaccgcgtgaccttattcgcccttattttatccctt
ggcctgcttgttgatgatccgattaccggtatcgacaacattgagcgtacgcttaagcag
gcaggtcgcaatgccagcgaaaaaattgttgcggcgatgcaggaaattcgtcccgcattg
ttgatgtctacgttaaccattattctggcgtttatacccttagcctttattaccgggatg
atgggaccctacatggcaccgatggcatttaatgttccggtatcggtgatgatctcaacc
ctggtcgcctttttggttactccctggcttgctaaaaaatttctgagaaccgaaaagact
tcccaaaccaagtcagctcaatctgaacacgctgcaagcgaatcggctataaccgaatct
gctctgacacagacaggtacaagcttatatcgtcgtattcttaatcctattctcgagcgc
cgcggtcgaatcaaattgggattggttgcggtactcatattgttcatcgcctcggcatca
ctgccaatcttccgagcggtgccattaaagctattgccttttgataacaaaaatgaaatt
caggttttactggatttacctgaaggcgcttctcttgaacaaaccgcagcgttagcacaa
aaggtttcaacaatcgctcagagcttaccggaagtcgaggctctggccgtttatgtgggc
gagtcttcccctatcgattttaatggtttagtacgtgggtattatcagcgacagggccaa
catcttggtgacattcgggtggttctaatcgataaagaggaacgccagcatcaatctcac
ggcgttgtcctgaggttacggcagcttttggcgccgttgcaaaccgacgatatttcgata
aaggttgtcgaagtaccgccaggaccgccggtgatgagcaccttagtgaccgaagtctat
gcagaacctttggtagacaaagatattcattatcaagccgcgaataaggtaaaagcacgt
ttagaacaagaagctcatgtggtcgaagtggattcgagcatgattgccagtcagcagatc
tcccggtttgtcattgataagcaaaaggcagcactttccgggatttccactcaggaagtg
aatcaagcacttgctattgcggttgatgggtcatttgcgggtgtgtatcagcagccattt
gatgctcagccaatcccaatcaaggtaaaacttccttttgaaataagacaggatttatct
catatctccgccatgcagttaaaaggccggatgggtattgcacagcaaaaccaggggtta
ggactggaaaacgcgccacaacccattgtacctttggccgaattaggaacatggcaaacg
aaatccgtatcgcagccgatcatgcgtaaagatcttcgcccggttatctacgtaactgcc
gagctttccggccgcacaccggccgaagttatcgccgatataagtagtgattttaatcaa
cctgaagcggcaggcaaagactggcagcaacgcacatttttaagctccggtgcaggcctt
ggctggagtttacccgatggcaccagctattcgttttccggtgaaggcgagtggcgcatt
accattgatgtatttcgcgatatgggtattgcctttgcttttgcgttaacgggtatcttc
attgtcctgaagtggcagactcaaagcaccgccttgtcgttaattattatgtcagcgatt
cccttgaccatcatcggcatcatgcccggctttttcctgatgaatcagtttggtgaaagg
gttattgccggggcgccagaacccgtgctattcaccgctacagcgatgataggcatgata
gcgttggcagggatagtggtcagaaactcgctgatcctggttgagtttatttctcaggcc
agagccgcgggggcgagcataaaagaagccattttaaccgctggcgaagtgcggatgcgg
ccggtattgctgaccgccggtaccaccttgcttggtaacctcatcatcaccctggatccc
gtttttaatggcctggcactggctattatcttcggcatcattgcatcgacattgttttca
ttgttggtggttcccatggtgtattttttagtatttgataaagactcaaacccagaaggt
atttcgattaatgactag
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