Thalassotalea sp. PS06: FNC98_11330
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Entry
FNC98_11330 CDS
T06100
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thap
Thalassotalea sp. PS06
Pathway
thap01501
beta-Lactam resistance
thap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FNC98_11330
01503 Cationic antimicrobial peptide (CAMP) resistance
FNC98_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thap03036
]
FNC98_11330
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thap02000
]
FNC98_11330
01504 Antimicrobial resistance genes [BR:
thap01504
]
FNC98_11330
Chromosome and associated proteins [BR:
thap03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FNC98_11330
Transporters [BR:
thap02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FNC98_11330
Antimicrobial resistance genes [BR:
thap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FNC98_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QDP01879
UniProt:
A0A516HDR4
LinkDB
All DBs
Position
complement(2557610..2558773)
Genome browser
AA seq
387 aa
AA seq
DB search
MQTMSKSSISIISLLSLFGLGLVACKPAPQQAPDVEVIVQEVKSFPYRGSAIFVGRLNAS
SDVKIQARVKAKIESINFSEGKEIKSGSVLFKLNDDELQAQRAQSEAEVSRARSALSAAD
KNYRRGQELAPDGYISSSELDALEAKFQEAQSALAAAEAKLDNAKVDLSYATIEAPISGK
IGRSIYSVGDIVSPESGELTTIVATNVMEVPFFVSEKVYWRMAKKFNEAKAQMPRAQRRD
EAIVKIALEKDDIYPHEGKITFVSNRVDPKTGTMEVRATIPNPDGILKPGQYVNVIVEEP
KQTPTVMIPQSAVQSDQQGDFVMVVDEKQEVSRQNVSLGERVDVMVIVNQGVKDGDTVVI
QGIQRIRSGQKVKPVQADAPTTPEQEG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccatgtcaaaatcgagtatttccataataagtttattgagcctgtttggcctt
ggcttagttgcctgcaaaccggcaccacaacaagcccccgatgtggaggttattgttcaa
gaggtaaaatcgtttccttatcggggaagtgcgatttttgttggccgattaaatgcgtca
agtgatgtcaaaattcaggcccgggtgaaggccaagattgaatcgataaacttttccgaa
ggtaaggaaatcaagtcaggtagcgtgttattcaagctcaatgatgacgaattgcaggcg
caacgggcgcaaagtgaagctgaagtttcacgcgcgcggtcagcgttgagcgccgctgac
aaaaactatcgtcgcggtcaggagctagcgcctgatggttatatttccagttcagagctt
gatgccctggaggcaaaattccaggaagcgcagtcggctttggctgccgcagaagcaaaa
ctggataatgctaaagtagatttaagttatgcaactatcgaggcgcccatatccggtaag
atcggacgcagtatatacagtgtcggtgatatcgtcagtccggaatccggagagttgacg
acaattgtggctaccaatgtcatggaagtgccattttttgtcagtgaaaaagtttattgg
cgtatggcgaaaaaatttaacgaagccaaagcgcagatgccgcgtgcccagcgtcgcgat
gaggcgattgtaaaaattgctctggaaaaggacgatatttatccccacgaaggcaaaatc
acctttgtctctaatcgtgtcgacccgaaaacaggaaccatggaagttcgcgccaccatt
cccaaccccgatggaattttaaaacccggtcagtatgtgaatgtcattgttgaagaaccc
aagcaaacaccaaccgtgatgattccgcaaagtgcagtacagtctgaccagcagggggat
tttgtgatggtggttgacgaaaagcaggaagttagccggcaaaatgtcagtctgggcgaa
cgggttgacgttatggtcattgtcaatcaaggggtgaaagatggtgataccgtggtgatt
caaggtatacagaggattcgcagtggtcagaaagtgaagccggtccaggctgatgctccg
accacccctgagcaagagggctga
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