Pukyongiella litopenaei: C6Y53_10685
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Entry
C6Y53_10685 CDS
T05357
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thas
Pukyongiella litopenaei
Pathway
thas01501
beta-Lactam resistance
thas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C6Y53_10685
01503 Cationic antimicrobial peptide (CAMP) resistance
C6Y53_10685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thas03036
]
C6Y53_10685
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thas02000
]
C6Y53_10685
01504 Antimicrobial resistance genes [BR:
thas01504
]
C6Y53_10685
Chromosome and associated proteins [BR:
thas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C6Y53_10685
Transporters [BR:
thas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C6Y53_10685
Antimicrobial resistance genes [BR:
thas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C6Y53_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
HH_YBHG
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
HH_CzcB
YknX_C
QRPTase_N
HH_AAEA_pHBA
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
AVO38126
UniProt:
A0A2S0MQL0
LinkDB
All DBs
Position
2157351..2158487
Genome browser
AA seq
378 aa
AA seq
DB search
MIGRGRLAAIAVLTILACPAGAQDGGGARPPAAVTVQTLAAQDVTITATLPGRIVASGRA
EVRPQVDGIVTDRLFTEGSEVEKGDPLYKIDDASYAALVAAASASVAQARANLDAAESEA
RRLQTLFDRKVASEQNVDDAKSDRDAKAAALQVAEAQLLAAQIDLDHTTIRAPLSGIVGR
SLTTQGALVTRGQAAALAVIRSIDPVHVDVTQSAAEVIRARRGLGDAGLDEADQSVTLRL
ADGGTYDQIGLLTAAEPYVDELTGVVVLRLTFPNPEQLLLPGMYVQVEMPQYVARDVILA
PQQGVTRDRRGRPVAMVVSADNTVEQRDLTILGDQGPHWIVTDGLADGDRIIVEGLQKIG
VGMTVAPEEQAAPGETGN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcggggccgactggcggcaatcgccgtgctgacgattttggcctgccccgcc
ggggcgcaggacggtggtggagcccgcccgcccgccgcagtcacggtgcagacgctggcc
gcgcaggacgtgacgatcaccgccacgctgccggggcggatcgtcgcttcgggcagggcc
gaggtgcgcccgcaggtcgacggtatcgtcaccgatcggctgttcaccgagggcagcgag
gtcgaaaagggcgacccgctctacaagatcgacgacgccagctatgcggcgctggtggcc
gcggcgtcggcgtcggtggcacaggccagggccaatctcgacgccgccgaaagcgaggcc
aggaggctgcagaccctgttcgaccgcaaggttgccagcgaacagaatgtcgatgacgcg
aaatcggaccgcgatgccaaggcggcggcgttgcaggtggccgaggcgcagctgctcgcc
gcgcagatcgacctggatcacaccacgatccgcgcgccgctgtcggggatcgtcggccgg
tcgctgaccacgcagggcgcgctggtgacgcggggacaggcggccgcgctggcggtgatc
cgcagtatcgacccggtccatgtggacgttacccagtcggcggccgaggtcattcgcgcc
cggcgcgggttgggcgatgcaggcctcgacgaggccgaccagagcgtgaccctgcggctg
gccgatggtggcacctatgaccagatcgggctgctgaccgcggccgagccctatgtcgac
gaactgaccggtgtcgtggtgctgcggctgacctttcccaaccccgaacagctgttgctg
ccgggcatgtatgtgcaggtcgagatgccgcaatatgtggcccgggatgtgatcctggcg
ccccagcagggcgtcacccgcgatcgccggggccgaccggtggcgatggtggtgagtgcc
gacaacaccgtcgagcagcgcgacctgaccatcctcggcgaccaggggccgcactggatc
gtcaccgatggcctggcggatggggaccgcatcatcgtcgagggcctgcagaagatcggc
gtcggcatgaccgttgcaccggaagaacaggccgcgcctggcgagaccggaaactag
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