Pukyongiella litopenaei: C6Y53_15230
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Entry
C6Y53_15230 CDS
T05357
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thas
Pukyongiella litopenaei
Pathway
thas01501
beta-Lactam resistance
thas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C6Y53_15230
01503 Cationic antimicrobial peptide (CAMP) resistance
C6Y53_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thas03036
]
C6Y53_15230
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thas02000
]
C6Y53_15230
01504 Antimicrobial resistance genes [BR:
thas01504
]
C6Y53_15230
Chromosome and associated proteins [BR:
thas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C6Y53_15230
Transporters [BR:
thas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C6Y53_15230
Antimicrobial resistance genes [BR:
thas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C6Y53_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
HH_MFP_RND
BSH_CzcB
YknX_C
BSH_CusB
Biotin_lipoyl
BSH_YknX
CzcB_C
HH_CzcB
TarH
Auts2
BSH_LcnD
DUF5667
Motif
Other DBs
NCBI-ProteinID:
AVO38922
UniProt:
A0A2S0MSS9
LinkDB
All DBs
Position
complement(3105382..3106488)
Genome browser
AA seq
368 aa
AA seq
DB search
MLALARPFAAQAQDDTAETAAPKVTVAAAYTDDITEEAVFIGRAEAVDRVDIVARVSGFV
DEVAVEDGASVKEGDLLYRIERDSYEASLSARQADLSKAEAQLDLARIELDRKSELLARG
SSPESERDLARANELAAEADVKAAHAAIRKAELELSYTDIHAPFDGKIGRNNASTGELVS
PSTGPLVTLVRQAPMFVRFSLSEKQLSSILEKLSTDTADLTKSERKPDVYVTLPNGSDMA
DPGEIVFVDNRISPQTGTISMLAQFDNDPQLLVDGAYVRVRIEAVQPTHALLIPQESIQR
DQRGDFVLAISPEQMVEQRYVTLGQQVGTAVVVEEGLREGESVIVEGLQRVRPGVKVDAV
LSGRASEG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctggcgcgaccgttcgcggcgcaggcccaggacgacaccgccgaaacggcg
gctccgaaagtgaccgttgccgcggcctataccgatgatatcaccgaagaggcggtgttc
atcggccgcgccgaagccgtggacagggtcgatatcgtcgcccgggtcagcggattcgtc
gacgaggtggcggtggaagacggggccagcgtgaaggaaggcgaccttctctaccgcatt
gagcgcgacagctacgaggccagcctgtccgcccgccaggccgatctgagcaaggccgag
gcgcagctcgacctggcccggatcgaactggaccggaaatccgagcttcttgcgcgcggc
tcgtcgcccgaatccgaacgcgacctggcccgggccaacgaactggccgccgaagccgac
gtgaaggcggcccatgcggcgatccggaaggccgagctcgaactgagctataccgacatc
cacgcgcccttcgacggcaagatcggccgcaacaatgccagcaccggcgaactggtcagc
ccctcgaccgggccgctggtcacgctggtccggcaggcgccgatgttcgttcggttttcc
ctgtccgaaaagcaactgtcctcgatcctcgagaaactgtcgaccgacaccgccgacctg
acgaagagcgagcgcaagccggatgtctatgtgaccctgcccaacgggtcggacatggcc
gatcccggcgagatcgtgttcgtggacaaccggatttctccgcagaccggcacgatctcg
atgctggcgcagttcgacaacgatccgcagctgctggtcgacggggcctatgtccgggtg
cgcatcgaggcggtgcagcccacccatgcgctgctgatcccgcaggaatccatccagcgc
gaccagcgcggcgatttcgtgctcgcgatcagccccgaacagatggtcgaacagcgctat
gtgacgctgggccagcaggtgggaaccgccgtggtggtcgaggagggactgcgagagggc
gaaagcgtgatcgtcgaggggctgcagcgcgtgcggccaggtgtgaaggtcgacgcggtc
ctgtccggccgggccagcgaaggctga
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