Thauera humireducens Piv1: C4PIVTH_4108
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Entry
C4PIVTH_4108 CDS
T09509
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
thau
Thauera humireducens Piv1
Pathway
thau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4PIVTH_4108 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thau03400
]
C4PIVTH_4108 (nth)
Enzymes [BR:
thau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C4PIVTH_4108 (nth)
DNA repair and recombination proteins [BR:
thau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4PIVTH_4108 (nth)
Prokaryotic type
C4PIVTH_4108 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAH1749240
LinkDB
All DBs
Position
C4PIVTH:4195013..4195654
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AA seq
213 aa
AA seq
DB search
MASMKREAIREFFRRLHDANPNPQTELEYASPYQLLVAVVLSAQATDRSVNIATRKLFAD
APTPEAMVSLGEEGIAEHIKTIGLFRNKAKNTLALSRLLLERHGGEVPAEREALEALPGV
GRKTANVVLNTVFRQPVMAVDTHIFRLSNRTGLAPGKDVVEVEKALMRRVPRDYLLDAHH
WLILHGRYVCTARSPKCGQCSVRDLCLFRDKTD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatgaagcgcgaggcgatccgcgagttcttccgccgcctgcacgacgccaat
ccaaacccgcagaccgagctcgaatacgcctcgccctatcagctgctggtggcggtcgtg
ctgtcggcgcaggctaccgaccgcagcgtcaacatcgccacgcgcaagctgtttgccgat
gccccgacaccggaggccatggtgtcgctcggcgaggaaggcatcgccgagcacatcaag
accatcggcctgttccgcaacaaggcgaagaacaccctggcgctgtcgcgcctgctgctc
gagcgccacggcggcgaggtcccggccgagcgcgaggcgctcgaggccctgcccggcgtc
ggccgcaagacggccaacgtggtgctcaacaccgtgttccgccagccggtgatggcggtc
gacacccacattttccgcctgtccaaccgcaccggcctcgcccccggcaaggacgtggtg
gaggtggagaaggcgctgatgcggcgcgtgcccagggactacctgctcgacgcccaccac
tggctgatcctgcacgggcgttacgtgtgcaccgcgcgcagcccgaagtgcggccagtgc
agcgtgcgcgacctgtgcctgttccgcgacaagaccgattga
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