Thermus sp. CCB_US3_UF1: TCCBUS3UF1_21070
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Entry
TCCBUS3UF1_21070 CDS
T01866
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K16792
methanogen homoaconitase large subunit [EC:
4.2.1.114
]
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc00300
Lysine biosynthesis
thc00680
Methane metabolism
thc01100
Metabolic pathways
thc01110
Biosynthesis of secondary metabolites
thc01120
Microbial metabolism in diverse environments
thc01210
2-Oxocarboxylic acid metabolism
thc01230
Biosynthesis of amino acids
thc01240
Biosynthesis of cofactors
Module
thc_M00433
Lysine biosynthesis, 2-oxoglutarate => 2-oxoadipate
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
TCCBUS3UF1_21070
09105 Amino acid metabolism
00300 Lysine biosynthesis
TCCBUS3UF1_21070
Enzymes [BR:
thc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
TCCBUS3UF1_21070
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Ortholog
Paralog
GFIT
Motif
Pfam:
Aconitase
AcnX_3rd
Lsr2_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
AEV17145
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All DBs
Position
complement(2098166..2099416)
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AA seq
416 aa
AA seq
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MGLTLAEKILSHKAGREVRAGELVVVEVDQVMVVDSIAGSFFKRLEYLEATPRYPERVSV
VIDHVAPAANLEVAKAQKEIREWGRRHGIRVFDVGRGVCHQVLVEEGLAQPGWIVVGSDS
HSTTYGAVGAFGTGMGATDIALAAASGRTWLRVPESVKVVFRGRLPQGVTAKDAALEMVR
LLTAEGATYMAVEIHLLDGAEALTRGERMTLANLTVEAGAKAGLVVPSGEILETYRVPDW
LYPDPDAHYVREVEIDLFALTPRVSVPFYVDNVHEVAAVKGKRVDQVFIGTCTNGRIEDL
RAAAEVLKGRRVAPWVRLLVVPASSQVLEEAAKDGTLLTLLEAGATLGTPGCGPCMGRHM
GVLAPGEVCVSTSNRNFRGRMGAPDAEIYLASPRVAAASAVAGYLTTPEDLEEVHA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaccttggcggaaaagatcctttcccataaggcgggaagggaggttcgggcg
ggggagctggtggtggtggaggtggaccaggtgatggtggtggactccatcgccgggagc
ttcttcaagcggctggagtacctggaggccaccccccggtacccggagcgggtttccgtc
gtcatcgaccacgtggcccccgcggccaacctggaggtggccaaggcccagaaggagatc
cgggagtgggggaggcggcacgggatccgggtctttgacgtgggccggggggtgtgccac
caggtcctggtggaggagggcctggcccagcccggctggatcgtggtgggctcggactcc
cactccaccacctacggggcggtgggggccttcggcacggggatgggggccacggacatc
gccctggccgcggccagcggccgcacctggctaagggtgccggaaagcgtaaaggtggtc
ttccggggccggcttccccagggggttacggccaaggatgccgccttggagatggtccgc
ctcctcaccgccgagggggccacctacatggcggtggagatccacctcctagacggggcg
gaggccctaacccgcggggagcgcatgaccctggccaacctcaccgtggaggcgggggcc
aaggcggggctcgtggtcccctcgggggagatcctggagacctaccgggtgccggactgg
ctctaccccgatcccgatgcccactacgtccgggaggtggagattgacctttttgccctc
acccccagggtttccgtgcccttttacgtggacaacgtccacgaggtggccgcggtgaag
ggcaagcgggtggaccaggtcttcatcggcacctgcaccaacgggcggattgaggacctg
cgcgcggcggcggaggtgcttaagggaaggcgggtggccccctgggtgcggctgctggtg
gtgcccgcctccagccaggtgctggaggaggcggccaaggacggtaccctcctcaccctc
ctggaggcgggggctaccctcggcaccccggggtgcggcccctgcatggggcggcacatg
ggggtcctggccccgggggaggtgtgcgtctccacctccaaccgcaacttccgcgggcgg
atgggggcccccgatgcggagatctacctggcaagcccccgggtggcggcggccagcgcc
gtggccggctacctgaccaccccggaggatctggaggaggtccatgcctag
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