Thermoflavifilum sp.: IMW88_08000
Help
Entry
IMW88_08000 CDS
T09844
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
theo
Thermoflavifilum sp.
Pathway
theo01501
beta-Lactam resistance
theo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
theo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IMW88_08000
01503 Cationic antimicrobial peptide (CAMP) resistance
IMW88_08000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
theo02000
]
IMW88_08000
01504 Antimicrobial resistance genes [BR:
theo01504
]
IMW88_08000
Transporters [BR:
theo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IMW88_08000
Antimicrobial resistance genes [BR:
theo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IMW88_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF6594
AcrZ
Motif
Other DBs
NCBI-ProteinID:
QOR75305
LinkDB
All DBs
Position
complement(1880262..1883288)
Genome browser
AA seq
1008 aa
AA seq
DB search
MNNFFATYRRPLSLILALILMGGLLVYTRMQTSLFPEITFPKIKVIADNGLQPVDKMMVT
VTKPLELAIKKIQNLQMIRSTTSRGSCEISAFLNWGANIDLGMQQINERISEIRSSLPPD
VQITVEKMNPSILPVMGYALESQRLTPIELKLLALYTIRPYLAQVPGISQIQIMGGRTKE
YWVTLHPEEMTALHLAPAAVAQAINKTNFVLSNGYVADYHRLYLSVTNDNLVNLNQLQHI
VITNSGKRVIYLKDIADVSVHEAIEYTRINANGHNAVLIGVIKQPNANLIDVSNQVEARV
KSLQHLLPPGVKMVPYYIQADFVHDAIHSVTDALWIGILLAIVVAILFLRSGKASATLLV
TVPITLALTLIALYAVGYTFNIMTLGAMAAAIGLIIDDAIVVTEQIHRTGEEHPDVDYPT
LVKKAIQYLFPAMVASSLSTIVIFIPFGFMSGVAGAYFQVLANTMIITLVCSFLVTWIGL
PVIYLLFSRKKRKQVPAQKVVKTQRWVQFFLKHVWVSIGFCLLLAALIFWILPRLGTGFL
PDMDEGSIVLDYTSPPGTSLDETDRMCRQVEKIIMSTPEVESYSRRTGTQMGFFITEPNT
GDYLISLKKNRKRTTAQVIDDIRRRIEASLPALRVDFGQVITDMLGDLTESTQPIEIKVF
GNDPTILHQIADSVAYWTSTVPGTADVFDGIVIAGPSVDVRPRADVLAQYGLTPADLQFQ
LQTQLQGAVVGQVLDQEQMTDVRMIYPHPSQRSVADIRNTEIFLPDGTLKPVSTFARISL
QRGSAEIQRENLQTVDIVTARLNQRDLGSVMRDIRSRISQHVVLPQGYHIEYGGSYAQQQ
RSFHELLLILITAGLLVCCVTAFMTRNLWVSLSILLIAALGTAGCILALLITGTPLNVGS
YTGIIMIVGIIGENAIFTFQQFHQRLDETKDVDEAMVYAISTRLRPKLMTALGAIIALMP
LALGIGVGAQLHQPLAIAVIGGFIMALPLLLMVLPSWLRIIYRRHSVA
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttctttgctacctatcgtcgtccactatccttaatcctggcactcatcctg
atgggaggactgctggtgtatacgcgcatgcaaacctcccttttcccggaaatcaccttt
cccaagatcaaggtgatcgccgataatggactgcagccggtcgataaaatgatggtgacc
gtcaccaagcccctggagctggccataaaaaaaatccagaacctgcagatgatccgcagc
accaccagccggggtagctgtgaaatatccgccttcctgaactggggagccaatatcgac
ctgggtatgcaacaaatcaacgaacggatttcggaaatccgcagcagcctgccccccgac
gtgcagatcaccgtggaaaaaatgaacccctccatcctgccggtgatgggctacgccctc
gaaagtcagcgcctgacccctattgaacttaaactgctggcgctctacaccatccgcccc
tacctggcgcaggtgcccggtataagccagatccagatcatgggcggccgtaccaaagaa
tactgggtgaccctgcatcccgaagaaatgacagcgttgcacctcgcgccggctgccgtg
gctcaggcaatcaacaaaaccaatttcgtcctctccaacggctatgtggccgactaccac
cgactctatctttcggtgacaaacgataacctggtgaacctcaaccagctacagcatatc
gtgataaccaacagcggcaaacgagtcatttatctcaaggatatcgccgacgtgagtgtg
cacgaagccatcgaatatacccgcatcaatgccaacggacacaatgccgtgctgatcggc
gtcatcaaacagcccaacgccaacctcatcgacgtgtcgaatcaggtggaagcccgcgta
aaaagcctgcaacacctgttgcctccaggcgtaaaaatggtgccctactatattcaggcc
gactttgttcacgacgccatccacagcgttaccgacgccctgtggattggcatcctgctg
gccatcgtcgtagctattctttttctgcgttccggcaaggccagcgccaccctgctggtg
acggtgcccattaccctggccctgacgttgattgcgctttatgccgtggggtataccttc
aatatcatgacgctgggcgctatggctgcagccatcggccttatcatcgatgatgccatc
gtggtcaccgaacaaatccaccgaacgggtgaggaacaccccgatgtagattatcccacc
ctggtaaaaaaagccattcaatacctgtttcccgccatggtggcctcatcgctcagcacc
atcgtcatcttcatccccttcggcttcatgagcggtgtggcgggcgcctattttcaggtg
ctggccaataccatgatcatcaccctcgtgtgttccttcctggttacctggattggcctg
cccgtgatttatctgttgttttcacgaaaaaaacgcaaacaggtacccgcacaaaaagta
gtgaaaacgcaacgctgggtgcagttttttctaaaacatgtgtgggtcagcataggcttt
tgcctcctgctcgccgccctgatcttctggatcctgcccaggctgggcacaggatttcta
cccgatatggacgagggttccattgtgctggattacacctctcctcccggcacttcgctc
gatgaaaccgatcgcatgtgccgccaggtggaaaaaatcatcatgagcacacccgaagtg
gaaagctattcccgcagaacgggtacccagatgggatttttcatcaccgaacccaatacc
ggcgattacctcattagcctgaagaaaaaccggaaacgcaccaccgcacaggtgatcgat
gatatccgccggcgtatcgaagcttcactgccggccctgcgggtagactttggtcaggtg
atcaccgatatgttaggcgatcttacggagtcgacccagcccatcgagatcaaggtcttc
ggcaatgaccccaccatattgcaccagatcgccgactccgtagcttattggacctccacc
gtgccgggcacggccgatgtgttcgacggcatcgtcattgccggcccctcggtggatgta
cgcccgcgggccgacgtgctggctcaatatggcctcacaccggccgacttacaatttcaa
ctgcagacccagctgcagggtgccgtggtgggacaggtactggatcaagaacagatgacc
gatgtgcgcatgatctatcctcatccttcacaacgcagcgtggccgatatccgcaacacc
gaaatctttttacccgatggcaccctgaaaccggtaagcacatttgcccggatctccctc
cagcgaggatcagccgaaatccagcgcgagaacctgcaaacggtagatatcgttactgcc
cgcctcaaccagcgcgacctgggcagcgtaatgcgggatatccgctcgcgcatcagtcag
cacgtggtattgcctcagggctatcatatcgaatacggcggcagctatgcccagcaacaa
cgttcttttcatgagctgctgctcatcctcatcacggccggtctgctcgtgtgctgtgtt
acggccttcatgacacgcaacctgtgggtatcgctttccatcttgctcatcgccgctctg
ggcacggccggctgcatcctggcactcttgattacaggcacacctttaaacgtgggaagc
tacacgggcatcatcatgatcgtgggcatcatcggcgagaacgccatcttcacctttcaa
caatttcatcaacgattggatgaaacaaaagatgtagatgaggccatggtgtatgccatt
tccacccggctccgtcccaaattgatgaccgccctgggagccatcatcgccctcatgccc
ctggccctgggcatcggcgtgggcgctcaactccaccagccgctggccatcgccgtgatc
ggcggatttatcatggccttacctttgttgctgatggtactgcccagctggctccggatc
atctatcgtcgccattccgttgcatga
DBGET
integrated database retrieval system
