Thermodesulfobacterium sp. TA1: F1847_05695
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Entry
F1847_05695 CDS
T06202
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet01501
beta-Lactam resistance
thet01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1847_05695
01503 Cationic antimicrobial peptide (CAMP) resistance
F1847_05695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thet03036
]
F1847_05695
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thet02000
]
F1847_05695
01504 Antimicrobial resistance genes [BR:
thet01504
]
F1847_05695
Chromosome and associated proteins [BR:
thet03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F1847_05695
Transporters [BR:
thet02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F1847_05695
Antimicrobial resistance genes [BR:
thet01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F1847_05695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
CzcB_C
BSH_CusB
BSH_CzcB
HH_EMRA
HH_YBHG
Beta-barrel_RND_2
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QER42257
LinkDB
All DBs
Position
complement(1114223..1115332)
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AA seq
369 aa
AA seq
DB search
MFRRLIWILLITLSFFGCSEKKVEKPQTMVIPVTAYQVPQPKDQAVELVYPGKTRSVSFV
TVSARITGILQRQYFKEGDFVKKGQVLFLIEPDLYEAAYISAKAGLEKALADYEKAEKDW
KRIEASFKARVVSEQERDAAFSAYKTAKANVEYAKAQLRQAEINLGYTKVIAPVSGIAGQ
RLVDVGNLVNPGTPLVTINQVDPIYVDFSFPDRDLIKLGFELTKKGLAGVKGLKVDLLIE
GKAYGYSGIIDFIDTLIDENTASVKARAVFKNPEKVLLPGQFVQVVVRGVKRRNVILIPQ
KAVFQTPTGPVVWVIRDNKVQPQPVKLGEASNDYVVIEEGLKPGDLIAIDNLLKLKPGIS
VKVEKVVGE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggagattgatctggatacttttaatcaccttaagtttttttggttgttctgaa
aaaaaggtagaaaaacctcagacgatggtgatacctgtaaccgcctatcaagtgcctcaa
ccaaaggaccaggcggttgagctggtctatccaggaaaaacaagaagcgtttcttttgta
acggtctcagcaaggattaccgggattttgcagagacagtattttaaggaaggtgatttt
gtcaaaaaaggacaggtgctttttttgatagagccggacttgtatgaggcagcctatata
agtgctaaagccggtttagaaaaagcgcttgctgattacgaaaaggctgaaaaggattgg
aaaaggattgaggcctcttttaaggcaagggttgtaagcgaacaagaaagagacgcagcc
ttttctgcttacaaaaccgctaaggcaaacgttgagtatgccaaagcccagctaaggcaa
gctgagataaaccttgggtataccaaggtgatagctccggtttctggaatagccgggcaa
agactggttgacgtaggtaatttagtaaatccaggaactcctctggtaacgatcaatcag
gtagacccgatctatgtagacttttcttttccggatagggatttaatcaaattagggttt
gagcttaccaaaaaagggttggcaggggttaaaggtcttaaggtggacttgctgatcgaa
ggaaaggcttatggttattcagggattatagactttatagatacccttatcgatgaaaac
acagcctcggttaaagccagggcggtgtttaaaaacccagaaaaagttttacttcctggg
cagtttgtgcaggtagtggttaggggggtaaaaagaagaaatgttatccttattcctcag
aaggctgtttttcaaacacctaccggtcctgtggtgtgggtaataagggataataaggtt
caacctcaaccggtaaaattaggagaggcctcaaacgattatgtggtgatagaagagggc
ttgaaaccaggggacctgatagccatagacaatctccttaaacttaagccaggtatttcg
gtaaaagtggaaaaggtggttggagaatag
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integrated database retrieval system
