Thermosynechococcus sp. TA-1: JW907_00820
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Entry
JW907_00820 CDS
T10117
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
they Thermosynechococcus sp. TA-1
Pathway
they01501
beta-Lactam resistance
they01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
Transporters [BR:
they02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JW907_00820
Antimicrobial resistance genes [BR:
they01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JW907_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QSF49365
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Position
168536..171670
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AA seq
1044 aa
AA seq
DB search
MISDFFIKRPVFATVCSLLIILVGTIALPTLPIEYYPNVTPPTIQVSANYAGANAETVET
NVTTILETQINGVEGMDYIDSSSNSFGNSNITITFTEGYDENIAAVDVNNLVASVTSQLP
PEVINTGVNVRKSTNQIVLALALYPREGYNYDATFISNYATLYVVQPLQRLNGVGQVQVF
GQRTYAMRIWLDPNRLASRGLTAQDVVRALSDQNVQVGAGIIGAPPAPEGQEFQISIQAQ
SRLASEEEFADIIIQRGDDGSVIRIRDVGRTELGAQNYNTNFQFDGRDAVGIGIYQLSGA
NALDIARAVEAEMAVLAEKFPPGLKWSVGFSTTDAVQESIKEVVITLIVAIILVIAVIFL
FLQDWRATIIPSITIPVSLVGTFAFMKAFDFSINSLTMFGLVLATGLVVDDAIVVVENVT
RLMEDEGMTPQEAASRSMEEVTGALIATSLVMMAVFIPVAFFPGVTGRLYQQFALTIVFA
IALSTFNALTLSPPLCALLLRRERPPMANFILFRWINRFLDTMRRGYERNLTVVVRLKYW
VLAGFVALLGVTYGLFQIVPGGFVPQEDQGYFVTLVQSPQGVSLEYTSNIVFKAADAIAQ
NPVVEHTFAIGGFSFFGIGSDKGIIFTSLKPWSQRPTLDQLLPQFQKAVVGELGAVVFSS
NVPTINLGGSGLGGFDMQVMDQQGLGLEALASSVNELILKANATPGLVSVNTPFAINAPQ
LNVTVDRTRALALGIPLKDIFNAMQIYLGSLYVNQFTIFARSYQVIVQADKQFRANPDDI
NRIYVRSEQNALIPLSNLVTIEQVSAPPIIYHHNLFRSAEVTGQNVPPLSDSQAMMTMAS
LAQEVLPNGIGYSWTGLSLESTRSAGQAPLIFGLGLVFVFLVLSAQYESYIDPLIIILSV
PLAIMGALLAQWLRGLSNDVFCQIGLVMLIGLASKNAILIVEFANQIRESKGTSIVKSVI
YAAEERLRPILMTAISFILGIFPLVIATGAGAKSRHSLGTSVTGGMLAATFLSFFVVPII
YILIKELVARLTKEKLEEATPTES
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgattagcgatttttttattaagcgcccggtttttgccacggtttgttctctgctgatt
attttggtggggacgatcgcgctgccaacgctgcccattgagtattaccctaacgttaca
ccgccaacaattcaggtgtctgccaactatgcaggtgccaacgctgaaaccgttgaaacg
aatgtcaccacgatcttagaaacgcaaattaatggcgtggaggggatggattacattgac
tccagcagtaacagctttggcaacagcaatatcacgatcaccttcactgagggctacgac
gaaaacattgcagcggtggatgtgaataacttagtggcatcagtcacctcccaactgcca
ccagaggtcatcaacactggggtaaatgtcaggaaatccacaaatcagattgttttggcc
ttagccctatacccaagggagggatacaactacgacgccacattcattagtaactacgcg
accctctacgtggtgcaacccctgcaacgtctgaacggggtagggcaggttcaggtcttt
ggtcaacgcacctatgccatgcggatttggcttgatcccaatcgcttagccagtcgcggt
ctgacggctcaggatgtggtgcgtgccctctccgatcaaaatgtccaggtgggagccggg
attattggtgcccccccagcaccagagggacaggagtttcaaatttctattcaagcccaa
agtcgcttggcctcagaggaagagtttgccgacattattattcagcgcggcgacgatggt
tccgtgattcgcattcgcgatgtcggtcgcaccgagctaggggcacaaaactacaacacc
aactttcagtttgatggccgtgacgccgttgggattggtatctatcaactcagtggtgcc
aatgccctcgacattgcccgcgctgtcgaagcggagatggctgttttagctgagaaattt
ccccccggtctgaagtggagcgtgggatttagcaccacggatgcggtacaggaatcaatc
aaagaggtggtcattacactcattgtggccatcatccttgtcattgccgtgatctttttg
ttcctgcaggattggcgtgccacgatcattccctcgatcacgattcccgtttccttggtg
ggcacctttgcctttatgaaggcttttgacttctcaatcaatagcttgaccatgtttggt
ctggtgttggccacggggctggtggtggatgatgccattgtggtcgtggaaaatgtcacc
cgtctcatggaagacgagggcatgaccccccaagaagctgccagtcgctcgatggaagag
gtgacaggggcactgattgccacctcgttggtaatgatggcggtctttatccctgtggcc
ttttttccgggggtcactgggcggctctatcagcagtttgctttgacgattgtttttgcg
atcgccctttctacgtttaatgctttaaccctctctccccctttgtgcgccctgctcctg
cggcgggaacgccccccgatggcgaactttattttgtttcgctggattaaccgctttctc
gatacaatgcggcggggctatgaacgcaacctgactgtggtcgtgcgcctaaaatactgg
gtgctggcaggctttgtggcactgctgggggtgacctacgggctgtttcagattgttccc
ggtggctttgtcccccaagaggatcaaggttattttgttacccttgtgcaatcgcctcag
ggggtgtccctcgaatacacgagcaatattgtcttcaaagcagcggacgcgatcgcccaa
aatccagtggtcgaacatacctttgctattggcggctttagcttcttcggcataggttca
gacaaggggattatctttacgagtctcaagccctggtcacagcggccaacccttgatcag
ttgctgccccagtttcagaaggccgtcgtgggtgaactcggagcagtagtgttttcatcc
aatgtgccgaccattaaccttggtggcagcggccttggcggctttgatatgcaggtgatg
gatcagcagggtctcggccttgaagcgcttgcgagttcagtgaacgagctaatcctcaaa
gccaatgcaacccccggccttgtgtcagtgaataccccctttgccattaatgccccccag
ttaaatgtaacggtcgatcgcacccgcgcccttgccttggggattcccctcaaggacatt
tttaatgccatgcagatttacttggggtcgttatacgttaaccaattcacgatttttgcc
cgcagttaccaagtgattgtgcaggcggataagcagtttcgcgcgaatcccgatgacatc
aaccgcatctatgtacgctcggagcaaaatgcgctcattcccctcagtaatcttgtcacg
attgaacaggtctcggcaccgccgattatttatcaccataacttgttccgttcggcggag
gtgactggtcaaaatgtgccacccctcagtgatagtcaagcgatgatgacaatggcatcc
ttggctcaggaggttctccccaatggcatcggctatagctggacggggttatccctagag
tccacccgctccgcaggccaagcaccgttgatttttggccttggtctcgtgtttgtgttc
ctcgtgctctcggcgcagtacgaaagctatattgaccccttgatcattatcctttcggtg
cctttggcgatcatgggcgctttgttggcacagtggttgcgggggctgagtaatgatgta
ttttgccaaattggtttggtgatgctgattggcctcgccagtaagaatgcaattctgatt
gtggagtttgccaaccaaattcgcgaaagcaagggcacgtccattgtcaagtcggtgatc
tatgccgccgaggaacggctgcgccccattttgatgacggccatctcctttattctgggc
atcttcccgctggtcattgctacgggtgctggggcaaaatcccgtcactccttgggaaca
agtgtcacaggcggcatgcttgcagccacatttctcagtttctttgtggtgccgatcatt
tacatcctcattaaggaactagtggcgcggctgaccaaggagaagcttgaggaagcaacc
ccaacggagtcttaa
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