Thiohalobacter sp. COW1: TspCOW1_16960
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Entry
TspCOW1_16960 CDS
T08363
Symbol
nth_2
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TspCOW1_16960 (nth_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thic03400
]
TspCOW1_16960 (nth_2)
Enzymes [BR:
thic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TspCOW1_16960 (nth_2)
DNA repair and recombination proteins [BR:
thic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TspCOW1_16960 (nth_2)
Prokaryotic type
TspCOW1_16960 (nth_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BCO31593
UniProt:
A0A7R7GM87
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All DBs
Position
1839476..1840123
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AA seq
215 aa
AA seq
DB search
MNKSKREAIFKRFQEANPDPTTELHYGNRFQLLIAVILSAQATDRSVNQATAALFRQVRT
PQAMLELGEAGLKRHIRTIGLYNSKASNIIATCRILAERHGGRVPGEREALEALPGVGRK
TANVILNTAFGEPTIAVDTHIFRVANRTGIAPGKTVLQVEKKLLKVVPEPYLRNAHHWLI
LHGRYTCTARRPRCPGCLIHDLCEYRHKSEPVERP
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtccaagcgcgaggccattttcaagcgcttccaggaagccaaccccgacccg
accaccgagttgcattacggcaaccgtttccagctgctgatcgcggtgatcctctccgcc
caggccaccgaccgcagtgtgaaccaggccacggccgccctgtttcgccaggtccgcacc
cctcaggccatgctcgaacttggcgaggcaggtctgaagcggcacatcaggaccatcggc
ctgtacaacagcaaggccagcaacatcattgccacctgccgcatcctggccgagcggcac
ggcggccgggtaccgggcgagcgcgaggcactcgaggccctgcccggcgtggggcgcaag
accgccaacgtgatcctcaatactgccttcggtgaaccgaccatcgccgtcgacactcat
atattccgcgtggccaaccgcaccggcatcgcccccgggaagaccgtgctgcaggtcgaa
aaaaaactgctcaaggtcgtgcccgaaccctatctcaggaacgcgcaccactggctgatc
ctgcacggtcgctatacctgcaccgcacgccggccgcgctgtccgggctgtctgatccat
gatctgtgcgagtaccggcacaagtcagagccggtcgaaaggccctag
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