Thiohalobacter sp. COW1: TspCOW1_29170
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Entry
TspCOW1_29170 CDS
T08363
Name
(GenBank) MexH family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thic
Thiohalobacter sp. COW1
Pathway
thic01501
beta-Lactam resistance
thic01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thic00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TspCOW1_29170
01503 Cationic antimicrobial peptide (CAMP) resistance
TspCOW1_29170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thic03036
]
TspCOW1_29170
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thic02000
]
TspCOW1_29170
01504 Antimicrobial resistance genes [BR:
thic01504
]
TspCOW1_29170
Chromosome and associated proteins [BR:
thic03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
TspCOW1_29170
Transporters [BR:
thic02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
TspCOW1_29170
Antimicrobial resistance genes [BR:
thic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TspCOW1_29170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
OEP
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
BCO32814
UniProt:
A0A7R7JEW9
LinkDB
All DBs
Position
3093913..3095127
Genome browser
AA seq
404 aa
AA seq
DB search
MGFPSNPAASDTVKPRPVIRSRFPYKSLSLLALVAIAVALVLTRPAPPPAAGEPPPLRVR
VATVAQEDVTPLERVSGRLQAARQSRLRFEVGGQVERRRVEPGMQVGAGQPLLELDAADL
RAAVTEARAGFSQEQTQIERDRRLLVLARDNVALQRDEVRRLESLSARELGSASQLDAAR
GQLLQLEAELARLQAGVDTAEARLALRRTALERAERDLARSVLKAPFAGVVNAVALETGD
YVTPGGEAVTLVDPTALDFYAELRGEVARALAPGQAVTVEVDGRMLEGRILALQAEPDET
TFTHAVRVRLDGAQASPGELAMAAFPLRRREAARLIPVTAVLRDEGRSYVFRVTDGRLER
LPVELGLRLDSRYIVRTGPAAGQVIVARDVAALSDGQPVEIVGD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggttttccttcaaatcccgccgcttccgacaccgtaaaaccccgccccgtgattcga
tccaggttcccgtacaaatccctgtcgctgctggccctggtcgcgattgccgtcgccctg
gtgctgacccggccggccccgccgccggctgcgggcgagccgccgccgctgcgggtacgg
gtcgcgaccgtggcgcaggaggacgtcacgccgctggagcgggtcagcggccggctgcag
gccgcgcgccagagccggctgcggttcgaggtcggcggccaggtggagcggcgccgggtg
gagccggggatgcaggtcggcgccggccagccgctgctggaactggacgccgccgatctg
cgtgccgccgtgaccgaggcccgggccgggttcagccaggaacagacccagatcgagcgc
gaccggcggctgctggtactggcgcgggacaatgtggcgttgcagcgggacgaggtgcgg
cggctggaatcgctcagcgcgcgcgaactcggctcggccagccagctcgacgcggcccgc
gggcagctgctgcagctggaggctgaactggcccggctgcaggccggcgtggacaccgcc
gaggcgcgcctggcgctgcgccggaccgcgctggaacgggccgaacgcgacctggcgcgc
agcgtgctgaaggcgcccttcgccggtgtggtcaatgcggtcgcgctggagacgggcgac
tatgtcacccccgggggcgaggcggtgacgctggtcgatccgacggcgctggatttctat
gccgagttgcgcggcgaggtggcgcgcgccctggccccggggcaggcggtgaccgtcgag
gtcgacggccggatgctggaggggcgcatcctggccctgcaggccgagccggacgagacc
accttcacccacgccgtgcgggtacgccttgacggggcgcaggccagtccgggtgagctg
gccatggcggcgtttcccctgcgccggcgcgaggccgcccggctgattccggtgaccgcg
gtgctgcgcgacgagggccgcagctatgtgttccgggtgaccgacggccggctggaacgg
ctgccggtcgaactggggctgcgtctggattcacgctatatcgtccgcaccgggccggcg
gcggggcaggtcatcgtggcccgtgacgtggccgcactgagcgacggccagccggtcgag
atcgtcggcgactag
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