Thiomicrorhabdus sediminis: FE785_08345
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Entry
FE785_08345 CDS
T05983
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00300
Lysine biosynthesis
thig00550
Peptidoglycan biosynthesis
thig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FE785_08345
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FE785_08345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
FE785_08345
Enzymes [BR:
thig01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FE785_08345
Peptidoglycan biosynthesis and degradation proteins [BR:
thig01011
]
Precursor biosynthesis
Amino acid ligase
FE785_08345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
QCU90642
UniProt:
A0A4P9K6G1
LinkDB
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Position
complement(1825909..1827522)
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AA seq
537 aa
AA seq
DB search
MANRTLNELLTFIERHANLQIMQKSGSLSGQVKLNQMTQDSRDVSSGDVFIALQGEQVHG
LRFLADVLQQGAAVIIADRPLRASEKALLEQIDHDVMVLALQNIQTMQGDLAAWFYGYPS
QSLKVIGITGTNGKTSCAFYCAQLLHAQQQKVAIIGTLGNGVFNGEMLLHALQKTRNTTP
NAVALQQLLAEFVALGVEWCVMEVSSHAICLGRIQGVHFCATALTQVTRDHMDFHPTLKH
YQQTKMQLFRDYHSDAKIINSEDEIGRELLTELLDLQKDEQQDQWSVWAYGEHCLISGLP
DLWLDNMHLCSYQLLALNEQGMQARFSTRKSIDDSNLTVNIPLIGRFNIENVSCSLAILL
SQGFALADLLASCGQLQAVMGRMQIVSQQPSVILDFAHTPDALQQVLIASRHHLEKEAKL
WVVFGCGGDRDRGKRPLMAEVAAEYADKVMVTSDNPRSEEPQWIIDEIMTGFDTAQKTSV
MQQVDRTEAIQQVLSLAAEHDLVVIAGKGHEDYQEIKGERQPYSDFDAVQQWLHSKR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagaactctgaacgagctcttaacatttattgagcggcacgcgaatctgcaa
atcatgcaaaagtcgggcagcttatctgggcaagttaagctgaaccagatgacgcaggat
tcacgtgatgtttcctcgggtgatgtgtttattgccttgcagggagagcaggtacatggt
ttgaggtttttggctgatgtcttgcagcagggcgctgccgtcattattgccgatagacct
ttgcgagccagtgaaaaagcgctgcttgagcaaattgatcatgatgttatggtgctggca
ctacaaaatatccaaaccatgcagggggatttagcggcgtggttttacggttacccaagt
cagtcgttaaaagtgattggcattaccggtaccaacggcaagacctcttgtgccttttat
tgtgcccagttattgcatgcgcaacagcaaaaagtcgccattatcggcacactgggcaat
ggtgtgtttaatggcgaaatgctgctgcatgcactgcagaaaacccgtaataccacaccg
aatgcagtcgcattacagcaattgttggccgagtttgtggcgctgggcgttgaatggtgc
gtgatggaggtttcctctcatgcgatttgtttgggacgtattcaaggggtgcacttttgt
gctacggccttaactcaggtgacgcgtgatcatatggattttcacccaaccttgaagcac
tatcagcagactaagatgcagctgtttcgcgactatcatagtgatgcgaaaattattaac
agcgaagacgaaatcggtcgcgaattgttgactgaattgcttgatttgcaaaaagatgag
cagcaggatcaatggtctgtttgggcttatggcgagcactgtttaatcagtggtttgcct
gatttgtggttggataatatgcacttatgcagctatcagctgttggccttgaatgaacaa
ggtatgcaggcgcgcttcagtacccgaaaatcgattgatgatagtaatttaacggttaat
attccattgattggccgctttaatatcgagaatgtcagttgcagcttggcgattttgtta
tcgcaaggttttgcgttagcggatttgttggcttcctgtgggcaattgcaagcggttatg
gggcgaatgcagattgtcagtcagcagccaagtgtgattttggattttgcccatactccg
gatgcattgcagcaggtattgatcgcatcgcgacatcacctagaaaaagaggctaagctt
tgggtggtgtttggttgtggcggcgatagagatcgtggtaaaagacctttgatggccgaa
gttgcggccgagtatgcggacaaggttatggtgacttccgataatccgcgcagtgaagag
ccgcaatggattattgatgaaattatgaccgggtttgacacagcccagaaaacttcagtg
atgcagcaggtcgatcgaaccgaggcgattcagcaggtcttaagcctggctgcagaacac
gatttggtggtaattgccggcaaaggtcatgaggattatcaggaaattaaaggcgagcgc
cagccatatagcgactttgatgcggtgcagcagtggctgcacagcaaaaggtga
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