Thiocapsa sp. M50B4: KFB96_09485
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Entry
KFB96_09485 CDS
T07253
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim01501
beta-Lactam resistance
thim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFB96_09485
01503 Cationic antimicrobial peptide (CAMP) resistance
KFB96_09485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thim03036
]
KFB96_09485
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thim02000
]
KFB96_09485
01504 Antimicrobial resistance genes [BR:
thim01504
]
KFB96_09485
Chromosome and associated proteins [BR:
thim03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KFB96_09485
Transporters [BR:
thim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KFB96_09485
Antimicrobial resistance genes [BR:
thim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KFB96_09485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
HH_AAEA_pHBA
HH_EMRA
BSH_CusB
CzcB_C
BSH_CzcB
DUF4772
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QVL50619
LinkDB
All DBs
Position
2093801..2094979
Genome browser
AA seq
392 aa
AA seq
DB search
MGSARRHIGIALAWPIGILLLLAGCNQTPGSSAAPAAPPPPEVGTVTIVARPTTLTTELP
GRTVPYRIAEVRPRVSGLIQDRLFTEGGEISAGQVLYQIDPAVYQAAYDSAEAALARSQA
TLDRARLKADRYALLAKSKAVSQEDNDDTQAALKEAVASVAVDQAALERAQIDLAYSRVE
SPIAGRIGRSTVTQGALVTANQAEELATVQQIDPIYVDLTQSSTQLLKLRRALADGRLET
PDGAQAKVTLILEDGRVHPHAGRLESSEVTVDQGTGTVTLRATIPNPEQELLPGMFVRAR
VEEGIRPDAILVPQQGVQHDRRGNPIVLVVNDEGTVEERKIETTRTIGDQWLVEAGLEPG
DRVIVEGSQKARPGTQVRVMDLSDQPGFAAVN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgcccgccgtcacatcggcatcgctctcgcttggccgatcggcatcctcttg
ctcctcgccggctgcaatcagacgcccggcagcagcgccgcgcccgcggcacctccaccg
cccgaggtcggcacggtcacgatcgtcgcccgcccgaccacgctgacgacggagcttccc
ggtcgtaccgtaccttatcggatcgcggaggtgcgaccgcgcgtcagcggccttatccag
gatcggctctttaccgaaggcggcgagatcagcgccggccaggtgctctatcagatcgat
ccggccgtctaccaggcggcctacgacagcgcggaggccgcgctggcacgctcgcaggcg
accctggatcgggcgcggctgaaggccgatcgctatgcgcttctcgccaaatccaaggcg
gtgagtcaggaggacaacgacgacacgcaggcggcgctcaaggaggccgtggccagtgtc
gccgtcgatcaggccgccttggagcgtgcgcagatcgacctcgcctacagccgggtcgag
tcgccgatcgccgggcggatcggccgctcgaccgtcacccaaggtgccttggtgacggcc
aaccaggccgaggagctggcgaccgtgcagcagatcgatcccatctatgtcgacctgacc
caatccagcacccagttgctgaaactgcgccgcgccttggccgatggtcgcctggagacg
ccggacggcgcgcaggcgaaggtgacgctcatcttggaggacggccgggtccatccgcat
gcgggacgcctggaatcctcggaggtcacggttgatcagggaaccggcacggtcacgttg
cgggccaccatcccgaaccccgaacaagagcttctgccggggatgttcgtccgcgcccgg
gtggaggaaggcatccgcccggacgccatcctggttccgcaacaaggtgtgcagcacgat
cgtcgcggcaacccgatcgtcctggtcgtcaacgacgagggcacggtggaggagcgcaag
atcgagacgacacgcaccatcggcgaccaatggctggtggaggccgggctcgagccgggc
gatcgcgtcatcgtcgagggcagccagaaggcgcgcccggggacgcaggtccgggtgatg
gacctgagcgatcagcccggcttcgctgcggtgaattga
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