Thiocapsa sp. M50B4: KFB96_10000
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Entry
KFB96_10000 CDS
T07253
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim01501
beta-Lactam resistance
thim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFB96_10000
01503 Cationic antimicrobial peptide (CAMP) resistance
KFB96_10000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thim02000
]
KFB96_10000
01504 Antimicrobial resistance genes [BR:
thim01504
]
KFB96_10000
Transporters [BR:
thim02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KFB96_10000
Antimicrobial resistance genes [BR:
thim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KFB96_10000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Xre_MbcA_ParS_C
Motif
Other DBs
NCBI-ProteinID:
QVL50703
LinkDB
All DBs
Position
2194695..2197985
Genome browser
AA seq
1096 aa
AA seq
DB search
MISKVFVDRPRLAAVVSTIIVVAGLLSIFNIPVSQYPNIVPPVVQVTASYPGADAQTIAD
TVGSPIEQQVNGVEGMIYMSSTASSAGTYNLTVTFEVGTDPNIAQVNTQNRVSQALAQLP
QEVQALGITVQAESTNLLLFINVFSPDGSKDPIFLSNFTTINIQNEVARIPGVGEASLFG
PLNYSMRIWLEPELMSALGIAPSDVIDAIQAQNLQAALGQIGGPPIADEQVLQYAIVTEG
QLVQPSEFEQIVVRTGEDGAIVRVKDIARVELGAEAYTQISYLNGKPAAAIGIYQSPRAN
ALDVAEAVRAELETLKTRFPAGVEAEVIYDSTLFVKASIQEIIFTLGITSVIVLLVVFIF
LQDLRATIVPALTIPVSLIGVFVVLLAAGFSANTISLFAVVLAIGLVVDDAIVVVENAQR
LMLEEGLDRRAASLKAMEQVTGPIISTTLVLFAIFAPVAFLPGISGEMFRQFALTISAAV
AISALNALTLSPVICSLVLRKPKAAKRGPFAWFNTGFDKTRDGYVGIVRIFARRAPIAGL
LIVLIGTVAVLLLDRLPTGFIPNEDQGVLFVDVSLPSGSALPRTTDVLTQVQEIASRTPG
VANVMTVSGFSMLTSAPSSNSGMGVIVLDPWDERTTPELRIKGLVANLQEQMSAIPEATV
FLFPPPPIPGLGQASGFTMQLEALGGQSPMELTQTLQGLITTAQQDPRIGRAYSSFSADV
PQLYLELDRTKAQYMDVPVADVFNTLQATFGSTYVNNFTYLGQTYQVNVQADQNARMTVD
DLAGAYVRSASGAMVPIGTLATIREQLGTDLVFRYNEFLTAMISGSPAPGHSAGDAMAAM
QEAAKKALPDGYGFEWTALSLQESQQSAGGEIAIFGLAVLFGYLFLVALYESWSIPFAVL
TSVTVAILGAAVTLWLAGLDNDLYTQIGLVLLIGLAGKNAILIVEFAKEQRESGKSLLDA
ALIAAHMRFRAVLMTALAFIIGLMPLVLATGAGANARIHLGSTVLGGMLFAVIFGILLIP
ALYVMFQWLGEKGEPGSSRNRRTRTTTPACSRRPRPRPLRQADRRSPRRRLIHRRRRAEG
GSATIDVGIPDRSLMP
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaaggtcttcgtcgatcggccacgccttgcggcagtggtctcgaccatcatc
gtggtggccggactcctgtcgatcttcaacatcccggtctcgcagtatccgaacatcgtc
cccccggtggtgcaggtcacggccagctacccgggcgcggacgcccagaccatcgccgac
acggtcggcagcccgatcgagcagcaggtcaacggcgtcgaaggcatgatctacatgtca
tcgaccgcctcctccgcgggcacctataacctgacggtcaccttcgaggtcggcaccgac
ccgaacatcgcccaggtcaatacccagaaccgggtctcccaggccctcgcgcagctgccc
caagaggtccaggcgctgggcatcacggtccaggccgagtccaccaatctgctgctcttc
atcaacgtcttctcgccggacggcagcaaggacccgatcttcctgtccaacttcacgacc
atcaacatccagaacgaggtcgcgcgcatcccgggcgtcggcgaggccagtctcttcggc
ccgctcaactattccatgcgcatctggctcgagcccgagctgatgtccgcgctcgggatc
gccccgagcgacgtcatcgacgccatccaggcccagaaccttcaggccgcactcggacag
atcggcggcccgcccatcgccgacgaacaggtcctccaatacgcgatcgtgaccgaaggc
cagctggtccagccgagcgaattcgagcagatcgtggtgcgtaccggagaggacggcgcc
atcgtgcgcgtgaaggatatcgcccgggtcgagctgggtgccgaggcctacacccagatc
tcctatctgaacggcaagccggccgcggccatcggcatctatcaatcgccccgggccaat
gcgctcgacgtcgccgaggcggtccgtgccgagctcgaaacactcaagacccgtttcccg
gcaggcgtcgaggccgaggtcatctacgactcgaccctcttcgtgaaggcgtcgatccag
gagatcatcttcacgctgggcatcacctcggtgatcgtgctcctggtcgtcttcatcttt
ctgcaggacctgcgcgccaccatcgtcccggccttgaccatcccggtatccctgatcggt
gtcttcgtcgtcctgctcgcagcggggttctcggccaacaccatcagtctcttcgcagtg
gtcttggcaatcggtctggtcgtcgacgacgccatcgtcgtggtggagaacgcccagcgt
ctgatgctcgaagaggggctcgaccgacgcgccgccagcctcaaggccatggagcaggtc
accggacccatcatctccaccaccctggtgctctttgcgatcttcgcgccggtcgccttc
ctgcccggcatctcgggcgagatgttccgccaattcgcgctgaccatctccgcggcggtg
gccatctccgcgctcaatgcgctgacgctctccccggtcatctgctcgctcgtgctgcgc
aagccgaaggcggcgaaacgcggacccttcgcctggttcaacacaggcttcgacaagacg
cgcgacggttatgtcggcatcgtgcgcatcttcgcccggcgcgccccgatcgcaggcttg
ctcatcgttctcatcggaacggttgcggtgctgctcctcgaccgcctgccgaccggcttc
atccccaacgaagaccaaggcgtgctcttcgtcgatgtgagcctgcccagcggctccgcc
ttgccgcgcaccacggatgtgctcacccaggtccaagagatcgcctcgcgcacacccggc
gtcgccaacgtcatgacggtctcgggtttcagcatgctgaccagcgcgccttcgtccaac
agcggcatgggcgtcatcgtcctcgatccctgggacgagcgcaccaccccggagctgcgg
atcaagggtcttgtcgcaaacctgcaggaacagatgagcgccatccccgaggccacggtg
ttcctcttcccgccgccgcccatccccggcctcggccaggccagcggcttcaccatgcag
ctcgaggccctcggcgggcagtccccgatggagctgacccagacgctgcagggtctgatc
accacggcccagcaggacccgcgcatcggccgggcctattcgtccttcagcgccgacgtc
ccgcagctctacctggagctcgatcggaccaaggcgcaatacatggacgtgcccgtcgcc
gacgtcttcaacaccctgcaggccaccttcggcagcacctacgtcaacaacttcacctat
ctgggccagacctatcaggtcaacgtccaggccgaccagaatgcacgcatgacggtggac
gatctggccggtgcctatgtccgctcggccagcggcgccatggtccccatcggcaccctg
gcgaccatccgcgagcagctgggcacagacctcgtcttccgctacaacgagttcctcacg
gcgatgatcagcggcagtccggcccccggacactcggcgggcgacgccatggccgccatg
caggaggccgccaaaaaggccctgcccgacggctacggctttgaatggaccgccctatcc
ctgcaggaatcccaacagagcgcaggcggcgagatcgccatcttcggcttggccgtgctc
ttcgggtacctcttcctggtcgcgctctacgagagctggtccatccccttcgccgtcttg
acctcggtgaccgtcgccatcctgggtgccgcggtcaccctctggctcgccggactcgac
aacgacctctacacccagatcggcttggtgcttctgatcggcctcgccggtaaaaacgcc
atcctgatcgtggagttcgccaaggagcagcgagagagcggcaagagcctgctggatgca
gccctcatcgcagcgcacatgcgcttccgcgccgtgctcatgaccgcgctcgccttcatc
atcggtctcatgccgctggtgctcgccaccggcgcaggcgccaacgcccgcatccacctg
ggctccaccgttctcggcggcatgctcttcgccgtgatcttcggcatcctgctcatcccc
gcgctctacgtcatgttccagtggctcggcgaaaagggggagcctggatccagtcgaaac
cggaggacgcggacgacgaccccggcgtgcagccgacggccaaggccaaggccactgagg
caggcggatagacgatcgccccgtcgccgactgatccaccgtcggcgacgggctgaaggc
gggagtgccacgatcgacgtggggattccggatcgaagtttgatgccatga
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