Thiocapsa sp. M50B4: KFB96_22405
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Entry
KFB96_22405 CDS
T07253
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thim
Thiocapsa sp. M50B4
Pathway
thim01501
beta-Lactam resistance
thim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KFB96_22405
01503 Cationic antimicrobial peptide (CAMP) resistance
KFB96_22405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thim03036
]
KFB96_22405
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thim02000
]
KFB96_22405
01504 Antimicrobial resistance genes [BR:
thim01504
]
KFB96_22405
Chromosome and associated proteins [BR:
thim03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KFB96_22405
Transporters [BR:
thim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KFB96_22405
Antimicrobial resistance genes [BR:
thim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KFB96_22405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QVL48333
LinkDB
All DBs
Position
4902258..4903460
Genome browser
AA seq
400 aa
AA seq
DB search
MSCSMRVLEPDSDGLSGTRRVSCRLGRLVCFFLVGGLTLSGCSETNAPAPEMPPPSVIVV
PAESRVVDEEASFVGRVIAVNRVDLRARVEGFLEERRFTEGQEVKVGDVLFVIEPGQYTA
AVEQRQADLEKARADQLNTAAQLARGLELVKAKNISQSSVDELQAADSIAKAGITLAQAA
LTRAMLDLSYTKITAPVAGRIGLASYTVGNLVGPASGTLATIVSRDPIYVQFPVTQRDLL
AARETIEDKGGNARDVKVRVRLPDGTVYEHAGRLDFVDVTTDPGTDSVTLRAELPNPDGI
LVDRQYVGVLLEAGAPESAILIPQSALQVDQQGVYVMILDADGKAQTRRIETGQNKGADA
VVTKGLAEGELVITQGIQQVRPGQAVSAAPATSAAAELEQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagcatgcgtgtcttggagcctgattcggatggcctgtccggaacccgccgc
gtctcgtgtcggctcgggcggctggtctgcttctttcttgtcggtggcttgacgttgtcg
ggctgcagcgaaacgaatgcacccgcgccggagatgccgccgccctcggtgatcgtggtt
cccgcggagtcccgcgtcgtcgacgaggaggcatcctttgtcgggcgggtgatcgcggtc
aaccgggtcgatctgcgtgcccgggtcgagggtttcctcgaagaacgtcgtttcaccgag
ggccaagaggtgaaggtcggcgatgtcctcttcgtgatcgagcccggtcagtacacggct
gctgtcgagcagcgccaagccgatctggaaaaggcgcgggccgatcaactcaacaccgcc
gcccaattggcgcgcggactggagttggtgaaggccaagaacatctcgcaatcctcggtc
gacgagctgcaggcggcggattcgatcgcgaaggcgggcatcacgcttgcgcaggcggcc
ctgacccgggccatgctcgatctgagctataccaagatcacggcgccggtggccggccgc
atcgggcttgcgagctacacggtgggcaatctggtcggtcccgcttcgggcaccttggcg
accatcgtgagtcgtgaccccatctacgtgcagttcccggtgactcagcgtgatctgctc
gctgcgcgcgaaaccatcgaggacaagggcggcaacgctcgggatgtgaaggtacgtgtg
cgtctcccggacggcacagtctacgagcacgcggggcgtctggatttcgtcgacgtgacc
acggacccggggacggactcggtgaccctacgcgccgagctgccgaacccggacggcatc
ctcgtcgatcgccagtatgtcggggtcctgctcgaagcgggcgcacccgaatcggcgatc
ctgatcccgcagtcggcgcttcaggtcgaccagcaaggtgtctacgtcatgatcctcgat
gccgacggcaaggcccaaacgcggcgcatcgagacggggcagaacaaaggggcggatgcc
gtcgtcaccaagggtctggccgaaggggagctggtcattacgcaggggatccagcaggtg
agacccggtcaggccgtgagcgccgcgccggcgacgagcgctgccgcggagctcgagcaa
tga
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