Thiomicrospira sp. S5: AYJ59_10340
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Entry
AYJ59_10340 CDS
T05796
Name
(GenBank) hypothetical protein
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
thio
Thiomicrospira sp. S5
Pathway
thio00300
Lysine biosynthesis
thio00550
Peptidoglycan biosynthesis
thio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYJ59_10340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYJ59_10340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thio01011
]
AYJ59_10340
Enzymes [BR:
thio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AYJ59_10340
Peptidoglycan biosynthesis and degradation proteins [BR:
thio01011
]
Precursor biosynthesis
Amino acid ligase
AYJ59_10340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
Motif
Other DBs
NCBI-ProteinID:
AZR83255
UniProt:
A0A3Q9I7I8
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Position
complement(2231425..2232894)
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AA seq
489 aa
AA seq
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MFDFLRLQVSGVAGHSVTRLTIDSRRVNAGTVFIALPGVSCHGMTFAGQAEQAGASAILT
DEAGLADFDVSGLKCPVYSVPNLQNRLPDLAKWFYDDPSRRVKIIGITGTNGKTSTSHYI
GQLLQSAGYKVALMGTLGNGLIGDLQPSRNTTLEVLVLNEWLARFAEQQVDYVVMEVSSH
AVSLNRIAGLQFDVVALTQVTRDHLDFHGSEAGYRAAKKQLFEAYPSRCQVLNLEDETGT
DLAEKAHQSILTYAQVAPNADVRLQSVSFQPTGLKGRLQLPVGECDFDLPLMGGFNVENL
LCAVSCVWCCGLDSGDIQKAVTHLRAVPGRMEVLTRPNQPTVVIDYAHTPDALQAVLAAV
GQHLPTGENDLWVVFGCGGDRDKGKRPLMGQVAAQLSGHVILTDDNPRSESPEAIVADIQ
AGFDKPADVIHDREQAIATAIQQAGPQAVVVVAGKGHEDYQEINGQRWPMSDQGAVEKAF
QSLSRQGEA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgactttctgaggctgcaggtttccggagttgcaggccattcagtcacgcgtttg
accatcgactcccggcgggtgaacgctggaacggtgtttatcgcgctgccgggcgtgtcc
tgtcacgggatgacgtttgccggtcaagccgaacaagcgggcgccagcgccatcctaacc
gatgaggcaggcctggcggattttgatgtttctgggctgaagtgcccggtgtattcggta
ccgaatttacaaaaccgtttaccggacctggcgaaatggttttacgacgatccgagtcgc
cgggtgaaaatcattggcattaccggcaccaatggtaagacatcgaccagtcattacatt
ggccaattgttgcagtcagccggttacaaagtggctttaatgggcaccctgggcaatggt
ttgattggtgatctgcagccgagtcgtaatacgactttggaagtgctggtgttgaacgag
tggctggcacgttttgcggaacagcaggtcgattatgtggtgatggaagtctcgtcccat
gccgtcagtttgaaccgcattgccggtttgcaatttgatgtggtggctttgacgcaggtg
actcgggatcatttggattttcacggttccgaagccggataccgtgccgcaaaaaaacaa
ttgttcgaggcctatccgagccgctgtcaggtgttgaatctggaggatgaaaccggtacg
gatttggctgaaaaagcccatcaaagtattttgacttacgcccaagtggcgccgaatgcg
gatgtccgtttacaatcggtatcgtttcaaccgacgggcttgaaaggccggttgcaattg
cctgtcggtgagtgcgatttcgatttgccgctgatgggtgggtttaatgtggaaaaccta
ttatgcgctgtcagttgtgtttggtgctgcggcttggattccggcgatattcaaaaagcc
gtcacacatttacgggccgtgccgggcagaatggaagtgttgacgcgcccaaatcaacca
acggtggtgattgattacgctcatacaccggatgccttacaagctgttttggcggcggtg
gggcaacatttaccgactggagaaaacgacttatgggtcgtgttcggttgcggcggggat
cgggataagggaaaacgaccgctcatgggtcaagtggcggctcaattgagtggtcatgtg
attttgaccgatgataatccgcggtcggaatcgcctgaagcgattgtggcggatattcaa
gccggcttcgataaaccggccgacgtgattcatgaccgtgagcaagcgatagccaccgcc
atccaacaagccggaccgcaagcggtggtcgttgtggcggggaaagggcacgaagattat
caggaaatcaatggtcagcgatggccgatgagcgatcaaggcgccgtggaaaaggcgttc
caatcgttatcaagacaaggggaggcatag
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