Thiohalocapsa sp. PB-PSB1: N838_01135
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Entry
N838_01135 CDS
T07019
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip01501
beta-Lactam resistance
thip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N838_01135
01503 Cationic antimicrobial peptide (CAMP) resistance
N838_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thip03036
]
N838_01135
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_01135
01504 Antimicrobial resistance genes [BR:
thip01504
]
N838_01135
Chromosome and associated proteins [BR:
thip03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N838_01135
Transporters [BR:
thip02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N838_01135
Antimicrobial resistance genes [BR:
thip01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N838_01135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND
BSH_RND
YknX_C
HH_EMRA
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
PEP-utilisers_N
HH_AAEA_pHBA
CzcB_C
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QQO52190
LinkDB
All DBs
Position
complement(243741..245093)
Genome browser
AA seq
450 aa
AA seq
DB search
MLAGCPSSESPQSAAEPPAVGVIEVGEQKVNPFFEFVGKLRAAETVALRARVTGFLQERG
FDEGGVVEQGQVLFKIEPEQYQATLAQAQAELAAADASLNRAQVDLKRYRELAKAKNISQ
QKVDEAQAEVLVQEAMVQTAKANIEKAQLNMNYTQMTAPIAGRIDLAALDVGNLIGPDSG
VLATINLMDPIKVAFSISETWYYELARSDLEARRQGENIEEWTHVPLIRLPDGSIYEHPG
QFDFVDNKIDEKTGTVLIRAEFPNPDRILLPGQFVTVVIERKEAIDAVMIPQAAVLTDQG
GSYLLLVDDEDKVASRRIVTGQRFGANLVVRQGLKSGERIILYGVQKVRPGIKVKPELSE
LPGDPMKNPGADQAVEGKAANTPAPDAFGTTVAAQQGTAQSDDVSATAGDSAGIDGDAMA
DTEISAKTDKGADNGNTSTADTDAVEVQSK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctggccggctgtccatcttcggagtcgccgcaatcagccgccgaaccgcctgcggtc
ggtgtcatcgaggtaggcgaacagaaagtcaacccgtttttcgaattcgtcggcaaactg
cgagctgctgagacggtcgcattgcgagcacgggtaaccggttttttgcaggaacgtggg
ttcgatgaaggtggtgtcgtcgagcaagggcaagtgctattcaagatcgagccggagcag
tatcaggcaaccttggcgcaggcacaggcggagctggccgccgcggatgcttcgctgaac
cgggcgcaggtggatctgaagcgctatcgggaattggccaaggcgaaaaacatcagtcag
cagaaggtggacgaggcgcaggcggaagtgctggtgcaggaggccatggtgcagaccgcc
aaggcgaatatcgaaaaggctcagctcaatatgaattacacccagatgaccgcgcccatc
gccgggcgcatcgatttggccgcactggacgttggcaacctgatcggtccggattccggc
gtgttagcgacgatcaacctgatggacccgatcaaggtcgctttctccatctcagagacc
tggtattacgaactggctcgaagcgatctggaagctcggcgtcaaggtgagaacatcgaa
gagtggacccatgtgcccctgatccggctgccggatggcagcatctacgagcatccgggc
cagttcgacttcgtcgataacaagatagacgaaaagaccggaacggtgctgatccgggcc
gagtttccgaatccagaccggattctgcttccgggccaattcgtcaccgtcgtcatcgag
cgcaaggaggcgatcgatgcggtgatgatcccacaggccgcggtgcttacggaccagggc
ggcagctacctgttgctggtggacgatgaagacaaggtcgcatcgcgccgcatcgtcacc
ggccagcgttttggagccaatctggtggttcgacaggggctgaagagtggcgagcggatc
atcctctatggcgtgcagaaggtgcggcccggcatcaaggtcaagcccgaattgtcggag
ctgcccggcgatccaatgaagaatcccggtgcggatcaggcggtcgaaggaaaggctgcg
aatacgccggcgccagacgcattcgggacaacggttgccgcccagcaaggaacagcgcaa
tccgatgatgtctcggcaacggccggagacagcgctggcatcgacggcgatgctatggca
gataccgagatcagtgccaaaaccgacaagggcgccgacaacggcaacaccagcactgcg
gataccgatgctgttgaagtgcagtccaagtag
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