Thiohalocapsa sp. PB-PSB1: N838_08725
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Entry
N838_08725 CDS
T07019
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip01501
beta-Lactam resistance
thip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N838_08725
01503 Cationic antimicrobial peptide (CAMP) resistance
N838_08725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thip03036
]
N838_08725
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_08725
01504 Antimicrobial resistance genes [BR:
thip01504
]
N838_08725
Chromosome and associated proteins [BR:
thip03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N838_08725
Transporters [BR:
thip02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N838_08725
Antimicrobial resistance genes [BR:
thip01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N838_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QQO53430
LinkDB
All DBs
Position
complement(2097835..2099016)
Genome browser
AA seq
393 aa
AA seq
DB search
MGKTINRALLVAPLLLACALATPAMLHAAVAADDVYVVKQAEGLPTVSVGGTVIPYKEVT
MAAQIPGRIKYLAGIEGDAFARDELLVAIDDSELTAQRQALLAQIATADAQLRNAGVQFN
RELYAPRARSSPGGMGVPNLFDQFFTRPMEDFIGDRNQDAELSADLFASNTQIQEARNMM
MRLQAELRALDSKLRDARAIAPFDGVVVKKFIEVGDTVQPGQPLLNFADIEFLQVEVDIP
ARLRPGLREGMMLRAELDVQAQGTVGAGALPVRVAQIFPMADPQRHTVKVKFDLPQGMAQ
PGMYAKVLVPDFNAPARVNPVIPRSAIRFNGSLPGVYVLDEQGNPQLRLVRIGEPTPNGN
VTILSGLRAGENILTNPGPDVATGWSRESGKGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaacgatcaatcgcgcgctccttgtcgcgcccttgctgcttgcctgcgcgctt
gcaacgccagccatgctgcatgccgcggtggcggccgatgatgtctatgttgtcaaacag
gccgagggcctgcccacggtttcggtcggtggcaccgtcatcccctataaggaagtcacg
atggccgcgcagattcccggacgaatcaagtatctggcaggcatcgagggcgatgcgttc
gcgcgtgacgaattgctggtcgcgatcgacgacagcgaattgaccgcgcaacgacaggcg
ctgttggcccagatcgccaccgccgatgcgcagttacgcaatgccggggtacagttcaac
cgcgaactctatgcaccacgcgcgcgctcttcgcctggcggcatgggagtaccgaatctg
ttcgaccaattctttacccggccgatggaggacttcatcggcgatcgtaaccaggatgcc
gagctttccgcagatctattcgcgtccaacacccagatccaggaggcgcgcaatatgatg
atgcgacttcaggcagaattgcgcgcgctcgattcgaaattgcgcgatgcgcgtgcgatt
gcgcccttcgatggcgtggtggtgaaaaaattcatcgaggtcggcgatacggtgcaaccc
gggcagccgctgctcaattttgccgatatcgagtttttgcaggtcgaggtggatattccg
gccaggctgcgcccggggctgcgggagggaatgatgctgcgcgccgagctcgatgtgcag
gcccaggggacggttggtgccggcgctttgccggtgcgggtcgcgcagatcttcccgatg
gccgatccccagcggcatacggtcaaggtcaaattcgacctgccccagggcatggctcag
cccggtatgtatgccaaggtgctggtgccggatttcaatgccccggcccgggtcaacccg
gtcataccgcgctctgcgatccgtttcaatggcagtcttccaggtgtgtacgttttggat
gagcaaggcaatccacagcttcgcttggtgcgtatcggcgagccgacgccgaatggcaat
gtcacgatcttgagcggtctgcgcgctggtgagaacattctcaccaatcctggtccggat
gtggccaccggctggtcgcgagagtctggcaagggtcgctag
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