KEGG   Thiohalocapsa sp. PB-PSB1: N838_13100
Entry
N838_13100        CDS       T07019                                 
Symbol
cas5c
Name
(GenBank) type I-C CRISPR-associated protein Cas5
  KO
K19119  CRISPR-associated protein Cas5d
Organism
thip  Thiohalocapsa sp. PB-PSB1
Brite
KEGG Orthology (KO) [BR:thip00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:thip02048]
    N838_13100 (cas5c)
Prokaryotic defense system [BR:thip02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    N838_13100 (cas5c)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: QQO54139
LinkDB
Position
complement(3044097..3044744)
AA seq 215 aa
MKRYCLEVWGDYACFTRSEMKVERVSYDVITPSAARAIFEAILWKPAIRWHVRRIEVLRP
IRWLTIKRNEVATIATDRASADAPRGIFIEDDHVQRSALLLRDVAYRLHADLAFFSDKDR
AANPAKYWQIFERRADKGQCVNQPYLGCREFPAYFRRVPDGATEPPPIDASPDLGFMLFD
MDFADRADPKPMFFRALMHKGVIEVPACDSVEVRR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaaacgctactgcctagaggtctggggcgattatgcctgctttacacgctcagagatg
aaggtcgagcgcgtcagctatgacgtgatcaccccgtccgcggcacgcgccatcttcgag
gctatcctctggaagcccgcaatccgctggcacgtgagacgcatcgaagtgctgcggccg
atccgctggttgaccatcaagcgcaacgaggttgccaccatcgccacggaccgcgccagc
gccgatgcgccccgagggatattcatcgaggacgaccacgtgcagcgctccgcgcttctg
ttgcgtgacgtcgcttaccgactgcacgcggatctcgcgtttttttcggacaaagaccgc
gcggcgaatccggccaagtattggcagattttcgagcgccgcgcggacaagggtcagtgc
gtaaaccagccctatctcggctgtcgtgagttcccagcctactttcgacgcgtcccagac
ggagccaccgagccgccgcctatcgatgcatcaccggacctcggcttcatgctcttcgac
atggactttgcggatcgcgccgatcccaaaccgatgttcttccgcgctctgatgcacaag
ggcgtcatcgaggtgccggcgtgtgacagcgtggaggtgcggcggtga

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