Thiohalocapsa sp. PB-PSB1: N838_23880
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Entry
N838_23880 CDS
T07019
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip01501
beta-Lactam resistance
thip01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N838_23880
01503 Cationic antimicrobial peptide (CAMP) resistance
N838_23880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thip03036
]
N838_23880
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thip02000
]
N838_23880
01504 Antimicrobial resistance genes [BR:
thip01504
]
N838_23880
Chromosome and associated proteins [BR:
thip03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
N838_23880
Transporters [BR:
thip02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
N838_23880
Antimicrobial resistance genes [BR:
thip01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N838_23880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QQO55931
LinkDB
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Position
5643974..5645104
Genome browser
AA seq
376 aa
AA seq
DB search
MIRIILITTLAVVILIGSIVYTKLTQFAAMEEAAESMQQSPETVTAMTVEPALWEQTIPA
IGTLEPVQGVTLSAEVGGRVTAIGFESGATVDVGDVLLQLDTASEEAQLASAEASAALAK
ADLARTRTLGERKLAARDALDSAEARAKETLAQVGNIRALIARKTVRAPFSGRLGLRLVN
LGEIVREGDPIVSLQTLDPIYVDFSIPQGQLGRLRQGMQVRVLADAAPEKIFTGAIVAVN
PEVDVITRCVRVRAQVANPDEQLYAGMFARVEVVLPERQSVLPIVATAVLYAPYGDSVFV
IEEKENAHGGKTEQVLRQQFVRLGQARGDYIDVVDGLKAGDQLVTSGVFKLRTGMQVEID
NRLAPRASLTPSPRDS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtatcatattaattacgacgctcgccgtcgtcatcctgatcggttccatcgtc
tacaccaagctcacgcagtttgcggcaatggaagaagcggccgagtccatgcagcagtcg
cccgagacggtcaccgcgatgacggtggaacccgcgttgtgggagcagacgatcccggcg
atcggcaccctggagcccgtgcagggcgtcacgctgagcgccgaggtcggcggtcgggta
accgcgatcggcttcgaatccggtgcgaccgtcgacgtgggcgatgtgctgctgcaactg
gacaccgccagcgaggaagcccagcttgcctcggcggaagcctccgcggccctggccaag
gccgatctggctcgtactcgcaccctgggcgagcgcaagctcgccgctcgcgacgcactc
gacagcgccgaggcgcgcgccaaggagaccctggcgcaggtcggcaatatacgtgccttg
atcgcgaggaagacggtccgcgctcccttcagcgggcgcctcgggctgcgcctggtcaat
ctcggcgagatcgtgcgtgaaggcgatccgatcgtatccttgcagaccctggacccgatc
tatgtggatttctccatcccgcaaggccagctcggccgtttgcgccagggcatgcaagtg
cgcgttctcgccgatgccgccccggagaagatcttcaccggcgcgatcgtcgcggtgaat
ccggaggttgacgtgatcacgcgctgcgtgcgtgtacgcgcgcaggtggccaaccccgac
gagcagctctatgccggcatgtttgccagggtcgaggtggtgttgccggagcgccagagc
gtgctgccgattgtcgcaacggcggtgctctacgctccctacggtgactcggtgttcgtg
atcgaggagaaagaaaacgctcacggtggcaagaccgaacaggtgctgcgccagcaattc
gtccgcctgggccaggcgcgcggcgattatatcgacgtggtcgatggactgaaggccggt
gaccagctggtgaccagcggcgtgttcaaattgcggaccggcatgcaggtggagatcgac
aatcgactggccccccgggccagcctaacaccgagtcccagggattcttga
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