Candidatus Thiothrix singaporensis: HZT40_04455
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Entry
HZT40_04455 CDS
T06729
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
this00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HZT40_04455 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
this03400
]
HZT40_04455 (nth)
Enzymes [BR:
this01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HZT40_04455 (nth)
DNA repair and recombination proteins [BR:
this03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HZT40_04455 (nth)
Prokaryotic type
HZT40_04455 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
SctB2
Motif
Other DBs
NCBI-ProteinID:
QLQ30985
UniProt:
A0A7L6APF7
LinkDB
All DBs
Position
complement(873786..874430)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAKREEIFRRLHDADPNPTTELEYGSAFELLVAVILSAQSTDKGVNKATARLFPAANT
PETIYALGEDGLKDYIKTIGLFNSKAKNIIQTCRILVDKHNSQVPAQREALEALPGVGRK
TANVILNTAFRQPTMAVDTHIFRVANRTGIAPGKNVLEVEKALLKYVPKHYLLDAHHWLI
LHGRYTCVARNPKCRQCSIADLCEFKEKTPDVWQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagccaagcgggaggaaattttccgccgcctgcatgacgccgaccccaacccc
accactgaacttgaatatggcagcgcatttgaactgctggtcgctgtcatcctgtcggcg
cagtccaccgacaagggcgtcaacaaggccaccgccagactgtttcccgccgccaatacc
ccggaaacgatttatgcgctgggtgaggatgggctgaaagattacatcaagaccatcggc
ctgtttaacagcaaagcaaagaacatcatccaaacctgccgcatcctggtcgacaagcac
aattcacaggttcccgcacaacgtgaggcgctggaagccctgcccggcgttggccgcaaa
accgccaatgtcatcctcaacacggcattccgccagccaaccatggcggtggacacccat
atcttccgcgtcgccaaccgcaccggcatcgcccctggcaaaaatgtgctggaggtggaa
aaagccttgctcaagtatgttcccaaacattacctgctggacgcccatcactggctgatc
ctgcatggccgctacacctgcgtggcacgcaacccgaaatgcaggcaatgcagcattgcc
gacctgtgtgaattcaaggagaaaacccctgatgtttggcaatga
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