Candidatus Thiothrix singaporensis: HZT40_11790
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Entry
HZT40_11790 CDS
T06729
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this00300
Lysine biosynthesis
this00550
Peptidoglycan biosynthesis
this01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
this00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HZT40_11790
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HZT40_11790
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
this01011
]
HZT40_11790
Enzymes [BR:
this01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HZT40_11790
Peptidoglycan biosynthesis and degradation proteins [BR:
this01011
]
Precursor biosynthesis
Amino acid ligase
HZT40_11790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QLQ32155
UniProt:
A0A7L6ASU6
LinkDB
All DBs
Position
complement(2350800..2352293)
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AA seq
497 aa
AA seq
DB search
MTTMPLSTLLAGFVESAPDIKVSGLTLDNRKIQPGMAFVAVRGTRQHGLDHAEAAVRAGA
VAVLYEPENGLQQPPLSVELVPVPSLRERLGTLADRFNSSPSASLLMVGVTGTDGKTSVS
HFVAEAMNAAGTPASAVIGTLGIGLPGALKPATHTTPDALTVHALLRELCEEGFSSVAME
VSSHALDQGRVNGVRFDVAVLTNLTRDHLDYHCTVEAYAEAKRRLFHWPDLKAAVLNLDD
PFGRRLAEELQEKPVRLIGYGVGDPGAYPXDTLVAVDPVFDHAGISATVVAGQHXGRLSA
PVLGRFNLHNLLAALAVLLVAGMDFSDALQRLQQVRVVPGRMERVAASDAAGQLVVVDYA
HTPXALEQVLQAVRVHTRGRLLCVFGCGGDRDRGKRPLMAKXAESGADVVIITDDNPRSE
DSQQIFEDIMQGITNKKGVTCEHDRARAIRLAISRXQPGDTVLIAGKGHETVQILANGVT
PFDDRVQAMQALRECAA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatgccgttaagcaccttgctggctgggtttgttgaatctgctcccgatata
aaggtgagcgggctgacgctggataaccgcaaaattcaaccgggcatggctttcgtcgcc
gtgcgcggaacccgtcaacacggtctggatcatgccgaggcagcggtgcgcgctggcgca
gtggccgtgttatatgagccggaaaatggtttgcaacagccacccttgtcggttgagttg
gtgccagtgccttccttgcgggagcgcttgggcaccctcgccgaccgttttaattccagc
cccagcgccagtttgctcatggtgggcgtgaccggaacggatgggaaaacctccgtcagc
cattttgtcgccgaagccatgaacgcagcaggtacgccagcctcggcagtcatcggcacc
ttgggcattggcttgcctggtgcgttgaaaccggccacccataccacgccggatgcattg
acagtccatgccttgttgcgtgagttgtgcgaggaaggttttagctcggtggcgatggag
gtttcttcccatgcgctggatcagggcagggtcaatggcgtccgtttcgatgtggcggtg
ttgaccaatctgacccgcgatcacttggattaccactgcactgtcgaagcttatgccgaa
gccaaacgcaggctgttccattggccggatctgaaagccgccgtcctcaatcttgatgac
ccgtttggccgccggttagcggaggagttgcaagagaagcctgtgcggctgattggctac
ggtgtcggtgatcctggtgcctatcccnctgacaccctggtggcggttgacccggtgttt
gaccatgccgggatcagcgccacggtcgttgccggtcaacacncgggtagattgtcagca
ccggtgctcggcaggttcaatctgcataatttgctggctgccctggctgtcctgctggtt
gcgggtatggatttttctgacgcattgcaacgcttgcagcaggtgcgtgtggtgcctgga
cgcatggagcgtgttgctgccagcgatgcggcggggcagctggtggtggtggattacgcc
catacgccangtgcattggagcaagttttgcaggccgtgcgcgtacatacccgtggccgc
ttgctgtgtgtgttcggttgcggtggtgaccgtgacaggggcaagcgcccattgatggct
aaanaggcggaatcaggagctgacgtggtgatcataaccgacgataatccgcgctccgaa
gattcacagcaaatatttgaggacatcatgcagggcattactaacaagaagggcgtgacg
tgtgaacatgatcgcgcaagggctatccgtcttgccatcagccggncgcagccgggcgat
accgtattgattgcgggtaaaggccacgaaaccgtacagattttagccaatggcgtaacg
ccgttcgatgaccgtgtccaggcaatgcaggcgttgcgggagtgtgccgcatga
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