Candidatus Thiothrix singaporensis: HZT40_21900
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Entry
HZT40_21900 CDS
T06729
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
this
Candidatus Thiothrix singaporensis
Pathway
this01501
beta-Lactam resistance
this01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
this00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HZT40_21900
01503 Cationic antimicrobial peptide (CAMP) resistance
HZT40_21900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
this03036
]
HZT40_21900
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
this02000
]
HZT40_21900
01504 Antimicrobial resistance genes [BR:
this01504
]
HZT40_21900
Chromosome and associated proteins [BR:
this03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HZT40_21900
Transporters [BR:
this02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HZT40_21900
Antimicrobial resistance genes [BR:
this01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HZT40_21900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
SOAR
Motif
Other DBs
NCBI-ProteinID:
QLQ33827
UniProt:
A0A7L6AY01
LinkDB
All DBs
Position
4322815..4324158
Genome browser
AA seq
447 aa
AA seq
DB search
MKFLTRITGIGLLLLLAACNQQGAGEAGGGQAPAQVSVMAAKLLDAPVSFEYTGQVNGSN
EVEIRARVTGIIDKRLYEEGSAVKAGQTLFQLDDAMFKAQAAQAEAXLASARAQLQKAER
DYARVAPLSSKQLLSQSQRDDAESAVDIAKAAVMQAQASLDSARINLGYTTIKSPINGVA
GRLATXEGSLVQAGGDSLLTTVAQTDPAYVDFGMAEGDFQNLRQALSSGKLTLPEGGFTV
VLKTPAGAPLEQTGQMNFQDYKVDAQTGNVAMRATIENPKRRLLPGQFVRVMLQGAHRPN
AIVVPQQAVLDNPQGKYVYVMSKNEQGMDVALPHPVEAGEWVQMDGDLANGWILNSGIKE
GDQVIVDGMARIFFPGMPVQVGAPEAAKPEHAAADTPPATKGRKPNRRQPSPNHLLLIQN
QPVTGSKPCLPVSLSSAQSLPSSCQFS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccttacccggatcaccgggattggtttgctgcttttgctggcggcctgcaac
cagcagggcgcgggtgaggcaggcggcggacaagccccagcacaggtgtctgtcatggcg
gccaaattgctggatgcgccagtcagttttgaatacaccggtcaggtcaacggctccaac
gaagtggaaatccgcgcccgtgtcaccggcattatcgacaagcgcctgtatgaagaaggc
agtgccgtcaaagccgggcaaaccctgttccagcttgacgacgccatgttcaaggcacaa
gcggcacaggctgaagcgnngctcgccagcgccagggcacagctgcaaaaggctgaacgt
gattacgcccgggttgccccgctgtccagcaagcaactgcttagtcagagccagcgtgat
gatgccgaatccgccgtggacatcgccaaggccgccgtcatgcaagcccaggccagtctg
gacagcgcccgcatcaacctcggttacaccaccatcaagtcccccatcaacggcgtggcc
gggcgcctcgcaacgnncgaaggcagcctggtgcaagccggtggtgacagcctgctgacc
acggtggcgcagactgacccggcctatgtcgatttcggcatggcggaaggcgatttccag
aacctgcggcaagcactgtccagcggcaaactgacgctgccagaaggcggcttcaccgtg
gtgctgaaaaccccggcgggcgcaccgctggaacaaactggccagatgaatttccaggat
tacaaagtcgatgcacaaaccggcaatgtggcgatgcgcgccaccatcgaaaaccccaag
cgtcgcctgctgcccggccagttcgtgcgggtgatgctgcaaggcgcacaccgtccgaat
gccattgtcgtgccgcagcaggcggtgctggataatccgcagggcaaatacgtctacgtc
atgagcaaaaacgaacagggcatggacgttgccctgccgcacccggtggaggctggtgaa
tgggtgcagatggacggcgacctcgccaacggctggattctcaattccggcatcaaggaa
ggggatcaggtcatcgtggatggcatggcgcggattttcttccccggtatgccggtacag
gtcggtgcgccggaagcggccaagcctgaacatgccgctgcggatacgccgccagccacc
aaggggagaaaaccgaaccggcggcagccaagcccgaaccacctgctgctgatacaaaac
cagccggtaacggggagtaagccatgtttacccgtttctttatcgagcgcccaatctttg
ccttcgtcctgtcaattttcataa
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