Tarenaya hassleriana (spider flower): 104801007
Help
Entry
104801007 CDS
T04125
Name
(RefSeq) ATP-dependent helicase rhp16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
thj
Tarenaya hassleriana (spider flower)
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thj03400
]
104801007
DNA repair and recombination proteins [BR:
thj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
104801007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-RING_2
ERCC3_RAD25_C
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
TarH
Motif
Other DBs
NCBI-GeneID:
104801007
NCBI-ProteinID:
XP_010522367
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MSPPRMWYKGGPWPRPSARDDSSEEDLEFDQDDEIKSSSSSDDDRAISATAGEAEVVPAN
VRRRKKTRKRTDLAWQKWEKENMGGIDEHLSDDVNLDEHSETLAETAEQPPDVIVPLLKY
QKEWLAWAMNQEASVGGGILADEMGMGKTLQAISLALSTPKQGRALRYNRKPILSTLVVC
PKVAVSHWKSEIDHCTSPGSTKVIVYYGKDRRMNIRELTNYDFVITTYSTVLHESRGVQK
SFGDECPNCGRSIRKNIELHLSYCKSKAPSSEQGKEPDKTNAMVRNSRKKAKQTEGEVGV
HSIFWNRIILDEAHCMRDKRSKTARAVFALEAKYRWALSGTPLQNCIGELYAMIRFLQIR
PYSYHWCNHCDCSILDLSSWKQCPNCSHEAWKHFCWWNKYVGKPIRYHGNPLRGKRALIL
LKHKVLKEVLLRRTKKGRAADLALPPRIVELRRDSLDVKEADYYESLCKDSQAKFDTYVQ
AGTVYNNYVNIFELLVRLRQAVNHPYLVVVPNSAVRNVALTRDNANDQGCCICDQLAEDR
AVARCGHVFCMGCVLDFPGFERNTPCPACSKLTTPARKNNQKSAVPGFKASSIINKINLD
NFQSSTKIEALKEEIRIMVERDGSAKAIVFSQFVSFLDLINYALRESGVSCVQIDGTRTM
AERDAAISKFKEDKSCRIILMSLKVGGVALNLMVASHVFIMDPSWNPAAERQAQDRIHRI
GQHKPTRIVRFIIENTVEERILELQKTKEVLIDGMLGAGAIEAVHRLTLADLRSLFL
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggatgtggtataagggtggtccgtggcctcgacccagtgccagagat
gacagcagtgaggaagaccttgagttcgaccaagatgacgaaatcaaatcatcatcttct
tcagatgatgatcgtgccatctccgcaaccgcaggtgaggccgaggtggttcccgcaaat
gtcaggaggaggaaaaagacgaggaaaagaacagatctggcatggcagaaatgggaaaaa
gaaaacatgggtggtatagatgagcatttgtcagatgatgtgaatctggatgaacacagt
gaaactctcgcagaaacggctgagcagcctccagacgtgattgtacctctactgaagtac
caaaaggaatggttggcttgggcgatgaatcaggaagcctcggtaggaggaggcattctt
gctgatgagatggggatgggaaagaccttacaggccatctctcttgctctttccactccg
aaacaagggagggcgctacgttacaatagaaagcctatcttgagcacccttgttgtttgt
cctaaggtggctgtgtcgcattggaaaagcgaaattgatcattgtacctccccaggaagc
accaaagtgattgtttattatgggaaagacagaaggatgaacatcagagaactcacgaac
tatgattttgttataacgacctattccactgttctgcatgaatctaggggagttcagaag
tcatttggtgatgagtgtccaaattgcggccgatcaattcgtaaaaatattgagttgcac
ttgagttactgcaaatctaaggctccatcttcagagcagggcaaagaacccgataaaacc
aatgccatggtgcgtaacagtaggaagaaggccaagcaaactgagggagaagttggagta
cactctattttttggaaccgtatcattctggatgaggcacattgcatgagagataaacgt
agtaaaactgccagagctgtttttgctttggaagctaagtatagatgggctttgagtggt
acccctcttcagaattgcattggagagctttatgctatgattcgcttcttgcaaattcgt
ccatactcgtatcactggtgcaatcattgcgactgctcaattcttgatctgagttcgtgg
aagcagtgtcccaactgtagtcatgaagcctggaagcatttctgttggtggaacaagtat
gtgggtaagccaataagataccatggaaatcctctcagaggaaaaagagccctgatattg
cttaagcataaagttctgaaggaagttttactaagacgtactaaaaagggccgagcagct
gatctcgcacttcctcctagaatcgtagagttgaggcgagattccctggacgtaaaagaa
gcggattattatgaatcgctgtgcaaagacagccaggcaaaattcgacacgtacgttcag
gctggaactgtttacaataactacgtaaatatatttgaactccttgtccgtttgagacag
gctgttaatcatccgtaccttgtggtagttcccaattcagcagtcagaaatgttgccttg
actcgcgacaatgcaaatgaccaaggatgctgtatctgcgatcagttagctgaggaccga
gctgtagctcgctgtggacatgtgttctgcatgggttgtgtgcttgacttccctgggttt
gaaagaaatacaccatgcccagcttgctcgaaactaacaactccggcccgtaaaaacaat
cagaagagtgctgtcccaggatttaaagcctcaagcattataaacaaaataaacctcgac
aattttcagtcaagcacaaagatagaagctctgaaggaagaaatcagaatcatggtagaa
agagatgggtcggcgaaagcaattgtttttagccagttcgtgtcgttcttggacctgata
aactacgctctcagagagtctggggttagttgtgttcagatcgacggtaccaggaccatg
gcagaaagagatgctgctatcagtaaattcaaagaggacaagagctgccggattatattg
atgagcttgaaagtgggaggggttgctctcaatctcatggtggcttcccatgttttcata
atggatccttcgtggaatccggcagcagagcgtcaagcacaggataggatacacaggatt
ggacagcacaaacctaccaggatagtgagatttataatagagaacacggtggaggaaagg
attttggagctccaaaagactaaagaggttttgattgacgggatgttgggggcaggcgcc
atagaagctgttcacaggttgactttggcagatcttaggtccctgtttctgtga
DBGET
integrated database retrieval system
