KEGG   Tarenaya hassleriana (spider flower): 104806243
Entry
104806243         CDS       T04125                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104806243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thj03019]
    104806243
   03041 Spliceosome [BR:thj03041]
    104806243
   03032 DNA replication proteins [BR:thj03032]
    104806243
Messenger RNA biogenesis [BR:thj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     104806243
Spliceosome [BR:thj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    104806243
  U2 snRNP components
    104806243
 Complex B
  U1 snRNP components
    104806243
  U4/U6.U5 tri-snRNP components
    104806243
 Complex C
  U2 snRNP components
    104806243
DNA replication proteins [BR:thj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     104806243
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 104806243
NCBI-ProteinID: XP_010529347
LinkDB
Position
Unknown
AA seq 262 aa
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPGKGKKIN
EEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGLAAAAAGPGIGRAAGRGVPTAP
LVQAQPGLAGPVRGIGGPAPGMMQPQISRPPQFSAPPVIRPPGQMPPPPPAFAGQGPPPM
ARGPPPQGPPPPYGMRPPPQQFPVPPPQYGQRPMIPPPGPMMRGPPGPPPPRPGMPPPPG
GVPVFAPPRPGMPPPNPHNQQQ
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtcgatgtcgaagagctccaagatgcttcagttcatcaactaccggatgcgggtgacg
atccaggacggtcggcaactggtcggaaagttcatggcgtttgaccgccacatgaacctt
gtaatcggcgattgcgaggagttccggaagcttcctcctgggaaaggcaagaagatcaac
gaggagagagaggaacgccgaacactcggtctggtgttgctcagaggtgaagaggttatc
tcaatgactgtagaggggccgcctccgcccgaagagtctcgtgcgaagtcaggtttggcg
gcggcggctgctggtcccggaatcggccgtgctgccggtcgtggagtacccaccgctccg
cttgttcaggctcagcctggacttgctggtcctgttcgtggaattggtggaccagctccg
gggatgatgcagccccagatttcccgtccgccgcagttttcagctccgccggtgattcgg
cctccgggacagatgcctcctcctcctccagcttttgctggtcaaggccctccacctatg
gcgcgaggtcctccgccgcaaggtcctcctccgccatacggtatgaggccgcctccgcag
cagttccccgtgccaccgcctcaatatgggcaaagacccatgattcctcccccgggtccg
atgatgagaggacctccgggtccgcccccgccccgtcccggaatgcctccgccgcctggt
ggtgttcccgtatttgctccaccgcgtcctggcatgcctccgccgaatccccataatcag
cagcagtga

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