Tarenaya hassleriana (spider flower): 104827018
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Entry
104827018 CDS
T04125
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
thj
Tarenaya hassleriana (spider flower)
Pathway
thj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104827018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thj03019
]
104827018
Messenger RNA biogenesis [BR:
thj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104827018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA
AAA_23
AAA_30
ORC-CDC6-like
AAA_25
nSTAND3
AAA_7
Zeta_toxin
AAA_28
TsaE
Motif
Other DBs
NCBI-GeneID:
104827018
NCBI-ProteinID:
XP_010558330
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MAVKEEDKPNPTVEISGLRFTYPGIDGHPPPGSKPLIDDFSLTLNSGDRCLLVGSNGAGK
TTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMD
IPAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEEWPSHIVYVANGRLQLAMPM
EKVRETSKMSLMRTVEKWLRKERDEERKRRKERKAKNLPEFEPRVEESRVAGGAARASVA
RVMNNGWAPGRLHSTIAGADENFLFSSNRVLRQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggaagaagataagccgaacccgacggtggagatctctggacttcggttc
acatatcctggaatcgatggccatcctccgccgggatcgaagcctctcatcgatgatttc
tctctgacgctcaactctggtgatcggtgcctcctcgtcggatcgaatggagcggggaaa
acaacgattctgaagatactgggagggaagcacatggtggagccgcacatggttagggtt
cttggacgctcggcgtttcacgacactggtttgacatcatctggggacctttgctatctg
ggcggggagtggaggcgcgatgtggcgtttgcaggattcgaagttccgatacaaatggat
attccagcggagaaaatgatatttggagtagcgggtatcgatcctcagagaagagctgaa
ctaatcaaggttttggatatcgatctctcgtggagattgcacaaggtttcggatgggcaa
agaagacgtgtccagatttgcatgggtctcctcaagcctttcaaggttctccttctggac
gagataacagttgatcttgatgttctggcaagagctgacctcttgaaattcctaagaaag
gaatgtgaagaacggggagcgactatcatctacgcaacccatatattcgatggtctcgag
gaatggccctctcacattgtgtacgtggcgaacgggaggttgcagttagcaatgccgatg
gagaaggtgagagagacgagcaagatgtcgctgatgaggacggtggagaagtggctgagg
aaagaacgggacgaggagaggaagaggcggaaggagaggaaagcaaagaatctgccagag
ttcgagcctcgggtggaagagagccgtgtggcggggggggccgcacgtgcctccgtggct
agggttatgaacaacggctgggcccctggaaggctccactctaccatcgcaggtgctgat
gaaaatttcctcttcagctcaaacagagttctcaggcagtaa
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