Tetragenococcus halophilus NBRC 12172: TEH_11050
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Entry
TEH_11050 CDS
T01640
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
thl
Tetragenococcus halophilus NBRC 12172
Pathway
thl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TEH_11050 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thl03400
]
TEH_11050 (nth)
Enzymes [BR:
thl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TEH_11050 (nth)
DNA repair and recombination proteins [BR:
thl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TEH_11050 (nth)
Prokaryotic type
TEH_11050 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-GeneID:
11260910
NCBI-ProteinID:
BAK94432
UniProt:
A0AAN1SGF8
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All DBs
Position
1098780..1099475
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AA seq
231 aa
AA seq
DB search
MSEEVLLTNKETTTVAQAINKLYPKLGTDLNHESNFQLLCAVLLSAQTTDVSVNKVTPQL
FEKFPTPEAMSVASLEDIQENIRSIGLYKNKAKYLKNMSQMLLEKFEGQIPDNREELTTL
PGVGRKTANVVLTNGFNIPAFAVDTHIKRVTRKLHFVPQDASVEKVEQMMSDKLPEDMWY
PAHHSILLFGRYQCIARKHDHSECIERIKENMPENEIAASALEKMITEIEG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagaagttttattaaccaataaagaaacgacaacagttgctcaagccattaac
aagctctatccaaaattaggaacagacttaaatcatgaaagcaattttcaattgttatgc
gctgttttattaagcgcacaaacaacagatgtgtctgtgaataaagtaactcctcagctg
tttgaaaaatttccaacacctgaagctatgtcagtagcgtctttagaagatattcaggaa
aatattcgaagtattgggttgtacaaaaataaagcgaaatatttaaaaaatatgagtcag
atgttattggaaaaatttgagggtcaaattccagataatcgggaagagttaacaacttta
cctggcgtgggtagaaaaacggccaatgttgtattgacaaacggttttaatatcccggct
tttgcggtggacactcacattaaaagagtgacaagaaaactccatttcgttccccaagat
gcttcggtagaaaaagtggaacagatgatgtcagataaactccctgaagacatgtggtac
ccagcgcatcactcgatattgttgtttgggcgttatcaatgtatcgcacgtaagcatgac
catagtgagtgtatagagcgtatcaaagaaaacatgcctgaaaatgaaattgctgcaagt
gctcttgaaaagatgattacagaaatagagggttaa
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