Thermosynechococcus sp. NK55: NK55_04620
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Entry
NK55_04620 CDS
T02977
Symbol
rnd1a
Name
(GenBank) RND type export system MFP component Rnd1a
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
thn
Thermosynechococcus sp. NK55
Pathway
thn01501
beta-Lactam resistance
thn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK55_04620 (rnd1a)
01503 Cationic antimicrobial peptide (CAMP) resistance
NK55_04620 (rnd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thn03036
]
NK55_04620 (rnd1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thn02000
]
NK55_04620 (rnd1a)
01504 Antimicrobial resistance genes [BR:
thn01504
]
NK55_04620 (rnd1a)
Chromosome and associated proteins [BR:
thn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NK55_04620 (rnd1a)
Transporters [BR:
thn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NK55_04620 (rnd1a)
Antimicrobial resistance genes [BR:
thn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NK55_04620 (rnd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
BSH_CzcB
RND-MFP_C
CzcB_C
BSH_CusB
Biotin_lipoyl
BSH_YknX
Beta-barrel_RND
HH_MFP_RND
MrpH_C
KH_DTX3L
Motif
Other DBs
NCBI-ProteinID:
AHB88247
LinkDB
All DBs
Position
982262..983365
Genome browser
AA seq
367 aa
AA seq
DB search
MKLAAVQTETLLQTAVYNASLQSRESITLQPQVSGRIAQINVQNGQFVNQGQPLILIDPS
EQQAVVASSLAAIQSAQANVENAHSILRALEAQRRANLATVEFNRIQAERYTALLAEGAV
SKEQAQSFITSFRTAQAALQQTEADIRAQQATIARLEKALLAAQANAQQQAIVLNWFQVR
APFSGVVGNIPPKVGDFVTPQTNLLTLTSNQPLEVYIQVPIEQIPRIRLGTPVELVDING
SVVGRSSVFFIAPNTTNNTQTILVKALYNNTRNNLRADQQIQARIILDQQPGILVPTTAV
SNLAGQNFVFVAEKDTEGKMIAKQKPIQVGAIQGNRYQVFKGLKPGEEIVVSGIQRLRDG
VPITPES
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttgcggcggttcaaacggaaactcttttgcaaaccgctgtttacaacgcctct
ttgcaatcccgtgagtccatcaccctacaaccccaagtttcgggtcgaattgctcaaatc
aatgttcaaaacggtcagtttgtcaatcaaggtcagcccctcatcctcattgacccctca
gaacagcaagccgttgttgccagcagtttagccgcaattcaatccgctcaagcgaatgta
gagaatgcccactccatcctccgcgcccttgaagcccagcgacgtgccaatctcgccact
gtagagttcaatcggattcaagcggaacgctatacggcgctcttagcggaaggggctgtt
tccaaggaacaagcgcaatccttcatcaccagctttcgcaccgcccaagcagcactccaa
caaaccgaagccgatattcgtgcccaacaggccaccattgctcgcttagaaaaagccctc
cttgctgcccaagctaacgcccagcagcaggccattgtcctaaattggtttcaggtgcgc
gctccctttagtggtgttgttggcaatattccccccaaagtaggggattttgtaacgccc
caaaccaacctcctcaccctgacctcaaatcaacctctagaggtctatatccaagtgccc
attgagcagatcccccgcattcggctgggaacgccggtggagttagtcgatatcaatggc
agtgttgtcggtaggagttccgtttttttcattgcccccaacaccaccaacaatacccaa
accattttagttaaggcgctctacaacaatactcggaataatctccgtgccgatcaacaa
attcaagcccgtattattctcgatcagcaaccggggattctggtgccgacgacggccgtc
tccaatcttgccggccaaaactttgtctttgttgccgaaaaagacaccgagggcaaaatg
attgccaaacaaaagcccattcaagtgggggcaatccaagggaacagatatcaagttttt
aaaggcctcaaaccgggagaggaaattgttgtctcgggaattcagcgcctgcgcgatggt
gtgcccattactcctgagtcttaa
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