Thiomicrorhabdus immobilis: THMIRHAM_03950
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Entry
THMIRHAM_03950 CDS
T08420
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib01501
beta-Lactam resistance
tib01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THMIRHAM_03950
01503 Cationic antimicrobial peptide (CAMP) resistance
THMIRHAM_03950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tib03036
]
THMIRHAM_03950
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tib02000
]
THMIRHAM_03950
01504 Antimicrobial resistance genes [BR:
tib01504
]
THMIRHAM_03950
Chromosome and associated proteins [BR:
tib03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
THMIRHAM_03950
Transporters [BR:
tib02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
THMIRHAM_03950
Antimicrobial resistance genes [BR:
tib01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THMIRHAM_03950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
YknX_C
Beta-barrel_RND
HH_YBHG
HH_EMRA
RND-MFP_C
HH_CzcB
CzcB_C
Beta-barrel_RND_2
BSH_CzcB
HH_AAEA_pHBA
ARM_TT21_5th
Helical_CED_Drosha
Motif
Other DBs
NCBI-ProteinID:
BCN92610
UniProt:
A0ABN6CXK0
LinkDB
All DBs
Position
complement(466062..467225)
Genome browser
AA seq
387 aa
AA seq
DB search
MSLAVFSSKIRLKIGIIGGLLLAPSILFAAQQAPAKPTLPVAVKTVHKQDIAVYSEYSAR
TRATQQTEVYARVSGILEKKFFTEGQIVKAGQRLYKIDDRKYRASVVKAKAELAVAQANY
NKAEREYKRVKGLYKNKAVSEQEVDNALSALELAKATIEGQKAALNEVQIDLDYTDVKAQ
ISGVTGMKQQDIGNLVGSTAENALLTTITQLEQIHAVFAIPDANFSQMTTLSQQGKLELL
EQTEWKAELLDAQNQIIASGKVDFVGNQIDTSTGGVQTRALFDNQKLQLLPGQFVRLRVT
NALRKNIFVIPQKAVLQMGQQAFVYVVKDGIADLLPVQLADQQGDNWLVESGLKEGDQVV
LNNLIKLRPKTPVQIMPADSEKSQAVH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagccgtttttagctcaaaaattcgcctaaagataggaattattggaggctta
ctattagcgccttctattttgtttgccgcacagcaagcaccggccaaaccaacccttcct
gttgccgtaaaaaccgtacataagcaagatattgctgtttattcggaatattccgcacgt
actcgtgccacccaacaaaccgaggtttatgctcgtgtaagcggcattcttgaaaagaaa
ttttttaccgaagggcaaatcgttaaagcgggtcagcgcctctacaaaatagacgaccgc
aaataccgtgcatcagtagttaaagccaaagccgaactggctgttgcccaggccaactac
aataaagccgaacgagaatataaacgtgtcaaaggtttatacaaaaataaagccgtaagt
gaacaagaggtcgataacgcactctccgctttggaattggcaaaagccaccatcgaaggc
caaaaggcggctttaaacgaggtacaaatcgatttagactacacggatgtcaaggcgcaa
atttctggtgttacgggaatgaaacaacaagatattggcaaccttgtcggaagcaccgca
gaaaatgctttattgaccaccataacccaacttgagcaaattcatgcggtttttgcgata
ccagatgctaacttcagtcaaatgacgaccctttctcaacaaggcaaacttgaattgctt
gaacaaaccgagtggaaggctgaattgcttgatgctcaaaaccaaatcattgcctcaggt
aaagtcgactttgtcggcaatcaaattgatacctcaaccggtggggtgcaaacacgcgcc
ctattcgacaaccaaaaactccaactgttgcctggtcaatttgtccgtttaagagtgacg
aatgcgcttcgcaaaaatatttttgtgattccacaaaaagcggttttacaaatggggcaa
caagcgtttgtttatgtggttaaagacggcattgccgatcttttaccggtgcaattagca
gaccaacaaggcgataactggctggtggagtctggtttaaaagaaggtgaccaagtagta
cttaacaacctgattaaattacgtcccaaaacgcctgtacaaatcatgccagcagactca
gaaaaatctcaggcagttcattaa
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