Thermodesulfatator indicus: Thein_0156
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Entry
Thein_0156 CDS
T01546
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tid
Thermodesulfatator indicus
Pathway
tid03030
DNA replication
tid03410
Base excision repair
tid03420
Nucleotide excision repair
tid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thein_0156
03410 Base excision repair
Thein_0156
03420 Nucleotide excision repair
Thein_0156
03430 Mismatch repair
Thein_0156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tid03032
]
Thein_0156
03400 DNA repair and recombination proteins [BR:
tid03400
]
Thein_0156
Enzymes [BR:
tid01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Thein_0156
DNA replication proteins [BR:
tid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Thein_0156
DNA repair and recombination proteins [BR:
tid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Thein_0156
NER (nucleotide excision repair)
GGR (global genome repair) factors
Thein_0156
MMR (mismatch excision repair)
DNA ligase
Thein_0156
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thein_0156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH
PTCB-BRCT
HHH_3
HHH_8
UPF0758_N
BRCT_2
DUF4796_N
DUF4874
Cas12f1-like_TNB
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AEH44041
UniProt:
F8A8Z2
LinkDB
All DBs
Position
complement(160039..162120)
Genome browser
AA seq
693 aa
AA seq
DB search
MAESEKDAKQEKKPEIPPEIIERVKKLREEIEYHNYRYYVLDSPVISDAEYDALMRELKE
LEAKYPELVTPDSPTQRVGYPPAKEFRQVPHAEPMLSLDDAMTEEEVYEFDRRIKRLLNL
PEDAQIEYTVEPKLDGLAVELVYENGVFTVGSTRGDGYVGEDVTNNLKTIKSIPLRLRPL
TDDAPPVPKRLDARGEVFMEKEKFKQLNEERIKKGEPPFANPRNAAAGSLRQLDPNITAQ
RPLDIFFYGVGKVEGHKFKTQWEVLTTLPKWGLKTNPLCRLIKGIKEAIAYHHELEKKRD
ELPYEIDGVVIKVNDLSLWEKLGTKARSPRYALAYKFEPTQVTTQVLDIVVQVGRTGAVT
PVAILKPVKVGGVIVSRATLHNEDEVRRKDIRIGDWVLVQRAGDVIPEVVMPIKERRTGK
EKPFEMPKTCPVCGSKLVRKPGEAVWRCPNKNCYAQLVRHLQHFASRNAMDIEGLGEQVA
KALVDMGLVRDVGDLYYLSVEDFLQLPGFALKKAQNLYNAIQKSKKTTLPRFLYALGIRH
VGEVAAQTLAEHFKSLDKIMNASMAELMAIPGVGPEMARSIVEYFRNPHNREVIEKLLKA
GIEFEDLKEEKPEEKSLKGLTFVFTGALKTMTRDEAKKKVQALGGKVASDVSRNVDYVVV
GEKPGSKFTRAQRLGLKIIGEDEFLKMIGEKKE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagcgaaaaggatgctaaacaggaaaaaaagcctgaaatccctcctgaaata
atagaaagggtaaaaaaactccgcgaggaaatagaatatcacaactaccgctactatgtg
cttgattctccggttatttctgacgctgaatacgacgccttaatgcgagaactaaaagag
cttgaggcgaagtatcctgaacttgtaacaccagattctcccacccaaagagtcggctac
ccgccggccaaagaattcaggcaggtgcctcacgctgagcccatgctttctcttgacgac
gccatgactgaagaagaagtctatgagtttgacaggcgtataaaaaggcttcttaacctg
cctgaagacgcccaaatagaatataccgttgaacccaaacttgatggtctggccgtagaa
ctggtttatgaaaacggtgtttttaccgtgggctctacccgcggcgatggttatgtgggc
gaggatgtaactaataatttaaagactattaagtccattcctttgcgcttgaggccgctt
accgatgatgctccgccggtgcccaaacgccttgacgcccgcggtgaagttttcatggag
aaagaaaaattcaaacagcttaacgaagagcgtataaaaaaaggcgagccgccttttgcc
aatcccagaaacgcggcggctggttctttgcgccagcttgatcccaatattaccgcccaa
aggccccttgatatctttttctacggggtaggaaaagttgaaggtcataaatttaaaact
cagtgggaagtgcttaccacccttcctaagtggggccttaagaccaacccgttgtgccgt
ctgataaagggtataaaggaagctattgcttaccaccatgagctcgaaaaaaagcgcgac
gaattgccttacgaaatagacggcgtagtcattaaagttaatgacctctctctctgggaa
aagcttggcaccaaggcgagaagtccgcgctatgctttggcttacaagtttgaacccacc
caggttaccactcaggtgcttgacatcgttgttcaggtgggccgcactggagctgttacc
ccggtggccatacttaagccggtaaaagtaggtggcgtaattgtttcccgcgctaccctt
cataacgaagatgaagttcggcgcaaagatatccgtatcggcgattgggttctggtgcaa
agggcaggggatgtcattcctgaggtggtaatgcccataaaagaacgccgcaccgggaag
gaaaagccctttgaaatgccaaagacctgcccggtttgcggtagcaaacttgtgcgcaaa
ccaggagaagccgtctggcgctgccctaacaaaaattgttatgcccagcttgtaaggcat
cttcaacattttgccagccgcaacgccatggatatagaaggcctgggagaacaggtagcc
aaggccctggtagacatgggcctggtaagagatgttggcgatctttattatctctctgta
gaagattttctccagctacccggctttgctttaaagaaggcccaaaatctttataacgcc
atccaaaaaagcaaaaagaccacacttccgcgctttctttacgcgcttggtattcgccat
gtgggtgaagtagctgcccaaactttagccgaacactttaaaagccttgataaaattatg
aacgcctctatggcggagcttatggctattccaggcgtagggcctgagatggctagaagt
attgttgaatatttccgcaatcctcacaatcgggaggtcattgaaaagctccttaaagct
gggattgaatttgaagacttaaaagaagaaaaacctgaagaaaagtcccttaaagggctc
actttcgtctttaccggggccttaaagaccatgacccgcgatgaggccaaaaagaaagtc
caggccctgggaggcaaagtagcctctgatgtttctcgaaatgttgactatgtagtggtg
ggcgaaaagcctggttctaaatttacccgcgcccagcgcttggggctaaaaattataggc
gaagacgaatttttaaagatgatcggcgagaaaaaagaataa
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