Thioploca ingrica: THII_0626
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Entry
THII_0626 CDS
T03616
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tig
Thioploca ingrica
Pathway
tig01501
beta-Lactam resistance
tig01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tig00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THII_0626
01503 Cationic antimicrobial peptide (CAMP) resistance
THII_0626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tig03036
]
THII_0626
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tig02000
]
THII_0626
01504 Antimicrobial resistance genes [BR:
tig01504
]
THII_0626
Chromosome and associated proteins [BR:
tig03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
THII_0626
Transporters [BR:
tig02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
THII_0626
Antimicrobial resistance genes [BR:
tig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THII_0626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BAP54923
UniProt:
A0A090ABF3
LinkDB
All DBs
Position
736977..738095
Genome browser
AA seq
372 aa
AA seq
DB search
MNIKQFLMVYLPLSLALSPFAQAEPSAPKAALTVTVTKPVKATWHTSVLAMGTLNAWQEA
VIAAEVSGQRIAQVLVDVGDTVKQGQELALLAQESVQADLAQAQARVTQAEASLVEARAN
AGRARNLKADGALAAQQVDQYLTGEATAKANLAVQQAALQIQQIRLKQTRIVAVDDGVII
SRSAMLGAVVQAGTELFRLVRQNRIEWQAEVAGRDLAQIQPGQRAQLTLPSGESVNGEVR
RVAPTLDSNTRNATVYVSLPPDSPAKAGMFAQGEIFIGKTRALSLPQAAVIVRDGNNYVF
EINNENHVLQRLVKTERREAGRVEILDGITDTASVAASGGAFLNEGDTVRVVDAPHDQPH
DTLPAQKPQSEL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaacaatttctcatggtgtatttacctttaagccttgcgctatccccattc
gcgcaagccgagccatccgcgccaaaagccgccttaacggtcacagtgactaagcccgtg
aaagccacttggcacaccagcgtattagcaatgggaacgctgaatgcctggcaggaagcg
gtgattgccgctgaagtcagtggtcagcgcattgcgcaggtgttggtggatgtcggcgat
acggtgaaacaagggcaagaattggcgttattggcgcaagaatcggtgcaagcagatctg
gcgcaagcacaagcgcgggttacgcaggctgaagcgagcttggtagaagcccgcgccaat
gcaggtcgggcgcgtaacttaaaagccgatggcgccttagccgcgcagcaagtggatcaa
tatttgacgggcgaggccacagcaaaagccaatttagccgtgcagcaagccgccttgcaa
atccagcagattcgcctaaagcaaacccgcattgtggcagtagatgacggggtgattatc
tcgcgcagcgccatgctgggcgcagtggtgcaggctggcacggaattgttccgcttggtg
cggcaaaatcgcattgaatggcaggcggaagtggccgggcgggatttggcgcagattcaa
cccggtcagcgcgcccagttgacgttgcccagtggcgaaagtgtgaacggcgaagtgcgc
cgggttgcgcccaccctggattccaacacccgcaacgcaacggtgtacgtcagcttgccg
ccagatagccccgccaaagccggcatgtttgcgcaaggcgagatttttatcggcaaaacc
cgggcgttatccttgccgcaagcggcggtgattgtgcgcgatggaaataattatgtattt
gaaatcaataatgaaaatcatgttttacaacgactggtgaaaaccgaacggcgagaagcg
ggccgggtggaaatccttgatggaattactgacacggcgagcgtagcagcgagcggcggt
gcatttttgaacgagggcgacacggtgcgcgttgtggatgcgccgcacgatcagccgcac
gacacactacccgctcaaaagccgcaaagtgagctatag
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