Thalassospira indica: DY252_20100
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Entry
DY252_20100 CDS
T05581
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tii
Thalassospira indica
Pathway
tii01501
beta-Lactam resistance
tii01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DY252_20100
01503 Cationic antimicrobial peptide (CAMP) resistance
DY252_20100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tii03036
]
DY252_20100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tii02000
]
DY252_20100
01504 Antimicrobial resistance genes [BR:
tii01504
]
DY252_20100
Chromosome and associated proteins [BR:
tii03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DY252_20100
Transporters [BR:
tii02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DY252_20100
Antimicrobial resistance genes [BR:
tii01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DY252_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
OEP
Motif
Other DBs
NCBI-ProteinID:
AXO16276
LinkDB
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Position
complement(4263030..4264196)
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AA seq
388 aa
AA seq
DB search
MARKSTLLIAGVALIVVAASAYIFAKDDITALIAPDAQPASTGQRGGGERSLPVIAEYAS
LMDEKTVVEAVGTGKSALGVSIYPAVSGEVADVLVRAGDKVTEGQVLVILDSDRERLARD
LAAVQARDAEQLLARYEKARPLGAVAESEVDSARTALAEARIALDQAEVNLADRTILAPF
DGIVGIPQVEAGDRVDSSTAIVTLDNIDSILVDFEVAETRFDNVRPGQSVRVETWSLPGE
EFTGVVESIGSRIDPESRTFAVRARVPNPNSRLLAGMSFAVYVDIEGKQYPAVAEISVLW
GDEGTYVWRIDDEDKVSRVPVRVVKRTNGRILLDGGIAEGDLVVVEGVLRLRPGRTVSAT
IRGDNPAPENAPSDAGGVATREGAGEGS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaaatcaacgcttctgatcgcaggtgttgcactgattgttgttgcggcctct
gcctatatctttgccaaagacgacatcacggcgttaatcgcgcccgatgcgcaacccgca
agcaccgggcagcgcggtggcggcgaacgcagtcttccggtcattgccgaatatgccagc
ctgatggatgaaaagaccgttgtcgaagcggtcggcacgggcaaatcggccctgggtgtt
tcgatttatccagccgtgtcgggcgaagttgcagatgtgcttgtacgcgccggtgacaag
gtgaccgaaggacaggttcttgtcattctggactctgatcgcgaacgccttgcccgcgat
cttgctgctgttcaggcccgcgatgccgaacaacttcttgcccgctatgaaaaggcccgc
ccgctgggtgccgttgccgaaagcgaagttgacagtgcccgcaccgccctggccgaggcc
cgcatcgcccttgatcaggcagaggtcaatttggccgatcgcaccattctggcgccgttt
gatggcatcgtcggcattccgcaggttgaggccggcgaccgtgttgacagttccaccgcc
atcgtgacgcttgataacatcgatagcattctggtcgatttcgaagttgccgaaacccgg
tttgacaatgtccgtcccggccagtcggtccgggttgaaacctggagcctgccgggcgaa
gaattcaccggtgtggttgagtctattggtagccgcatcgatcccgaaagccgcaccttt
gccgtacgcgcccgggtgccaaaccccaatagtcgcctgctcgccgggatgtcctttgcg
gtttatgtcgatatcgaaggcaaacaatatcccgcagttgccgaaatctcggtcctgtgg
ggcgatgaaggcacctatgtctggcggatcgacgatgaagacaaggtctcgcgcgttccc
gtccgtgttgtgaaacggaccaatggccggatccttctggatggcgggattgccgagggc
gatctggtcgtggtcgagggtgtcttgcgtctgcgtccgggccggactgtttcggcaacc
attcgcggtgataaccccgcgcctgaaaatgcgccgtcggatgcgggcggcgttgccacc
cgcgaaggcgctggcgaggggtcctga
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