Tuwongella immobilis: GMBLW1_30080
Help
Entry
GMBLW1_30080 CDS
T06428
Name
(GenBank) efflux rnd mfp subunit : Efflux transporter, RND family, MFP subunit OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1220 PE=4 SV=1: HlyD_3
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tim
Tuwongella immobilis
Pathway
tim01501
beta-Lactam resistance
tim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GMBLW1_30080
01503 Cationic antimicrobial peptide (CAMP) resistance
GMBLW1_30080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tim03036
]
GMBLW1_30080
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tim02000
]
GMBLW1_30080
01504 Antimicrobial resistance genes [BR:
tim01504
]
GMBLW1_30080
Chromosome and associated proteins [BR:
tim03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GMBLW1_30080
Transporters [BR:
tim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GMBLW1_30080
Antimicrobial resistance genes [BR:
tim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GMBLW1_30080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Arb1
Rabaptin
Motif
Other DBs
NCBI-ProteinID:
VTR97322
UniProt:
A0A6C2YIZ4
LinkDB
All DBs
Position
1:complement(454878..456251)
Genome browser
AA seq
457 aa
AA seq
DB search
MSDSKIVWSVGLGLLLLWTAGCQRAGSGTPSTTTATSATASGPTISVISPKKLSLVRRVE
QPGTIRADEETPIFAHVTGYVRKVAVDIDQRVRGPKFDAQGKLLEPGELLAEIAVPEMEE
DLKQKQALTQQAFTEIEQANQHLATAEAQILAAEALVTEAKAGLKRAEAVHDRWESESNR
INMLVQSGVVDRQTQDETLNQFKAAVAGREEAIARVATAQAVARKSVAERDRAMADVNTA
KARREVARADLRRQEVMVQYAQLRAPYDGVITRRNVDTGHYLQPGLTSPIFVISREEKLR
VSVEVPELDAGLVRKGAPVTLHIPALRQPPLALTVARTAWSLDAGSRTLRTEMDLPNPEG
RLRPGMYVRAELAIPLPESWTIPTAAYLKLAEGGIVFRVVDDKAVRTPVQIGAILGDQLQ
LTAIQRDGKTWSEPSADDRLAMPAAQLAEGQPIPATP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcaaagatcgtttggagcgtgggattggggctattgctgctttggaccgca
ggttgccagcgggccggctccgggacgccatcgacaaccacggcaaccagcgcaaccgct
tctgggccaacgatttccgttatttcgccgaagaagctatcgctcgtgcggcgcgtggaa
cagcctggcaccattcgagcggacgaagagacgccgatcttcgcccatgtgacgggctac
gtccgcaaagttgccgtggacattgaccagcgcgtccgaggaccgaaattcgatgcccag
ggcaaactgctcgaaccgggggaactgctggccgagatcgcggtgccggaaatggaagaa
gatctgaaacagaagcaagccctgacccagcaagcatttacggaaatcgaacaagcgaat
cagcaccttgccaccgccgaagcgcagattctcgccgccgaggcattggtaacggaggcg
aaagcgggcctgaaacgggccgaggcggttcacgatcgttgggaatcggaatccaatcgc
atcaatatgttggtgcaaagcggcgttgtggatcggcagacgcaagatgagacgctgaat
cagtttaaggcggccgtggcgggacgtgaagaagcgattgcccgcgtggcgacggcccag
gcggtggctcgcaagagcgtcgccgagcgcgatcgggccatggccgatgtcaacacggcg
aaggcgcgtcgggaagtcgcccgcgccgacctgcgacgccaagaggtaatggtgcaatac
gctcaattgcgtgccccgtatgatggggtcatcacacggcgcaacgtggatactggccac
tacttacagccgggattgacctcaccgattttcgtgatttcacgagaagaaaaactgcgt
gtcagcgtggaggtgccggagttagatgccgggctggttcgcaaaggcgcgccggtgacg
ctgcacattccggcactgcgtcaaccaccgctggcgctgaccgtcgcccgcacggcgtgg
agtctggacgctggctcgcggaccctgcgcaccgaaatggacctgcccaaccccgagggt
cgcttgcgaccgggaatgtatgtgcgagcggaattggccatcccgttaccggaaagttgg
accattcccacggcggcgtacctgaaactggcggaaggcggcatcgtctttcgggtggtg
gatgacaaagcggtgcgtactcccgtgcagattggcgcgattctgggcgaccaactgcaa
ctgacggcgattcaacgcgatggcaaaacctggagcgaaccatcggcagacgatcgactg
gcgatgccagcagcgcagttggcagaaggtcagccgattcctgcgacaccatga
DBGET
integrated database retrieval system
