Thiomicrolovo immobilis: WCX72_06530
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Entry
WCX72_06530 CDS
T11235
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
timm Thiomicrolovo immobilis
Pathway
timm00020
Citrate cycle (TCA cycle)
timm00270
Cysteine and methionine metabolism
timm00620
Pyruvate metabolism
timm00630
Glyoxylate and dicarboxylate metabolism
timm00680
Methane metabolism
timm00710
Carbon fixation by Calvin cycle
timm00720
Other carbon fixation pathways
timm01100
Metabolic pathways
timm01110
Biosynthesis of secondary metabolites
timm01120
Microbial metabolism in diverse environments
timm01200
Carbon metabolism
Module
timm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
timm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
timm_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
Brite
KEGG Orthology (KO) [BR:
timm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
WCX72_06530 (mdh)
00620 Pyruvate metabolism
WCX72_06530 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
WCX72_06530 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
WCX72_06530 (mdh)
00720 Other carbon fixation pathways
WCX72_06530 (mdh)
00680 Methane metabolism
WCX72_06530 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
WCX72_06530 (mdh)
Enzymes [BR:
timm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
WCX72_06530 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
ApbA
F420_oxidored
UDPG_MGDP_dh_N
2-Hacid_dh_C
Glyco_hydro_4
Shikimate_DH
Sacchrp_dh_NADP
GFO_IDH_MocA
ThiF
Pyr_redox
Pyr_redox_2
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
XAU04160
LinkDB
All DBs
Position
complement(1266395..1267351)
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AA seq
318 aa
AA seq
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MNQGKRVGIVGAGNVGATVAYSLAMLGSCHEIILRDNKIEVAKGKALDMSQAAAAVRSHT
VVSVAESMEELTDCDVVVVTAGSPRLPGMSRDDLLMINAKITKEVVRGIAKYSPNAIIIM
VSNPLDAMTYVALKESGFDRSRVLGMAGILDSSRMAAFIQEKLGYGGGQIRASVMGGHGD
DMVPLPRYSTVAGVPLFDLLTEDEIDEIVDRTRHGGAEIVGYLKTGSAYYAPAKSTAIMV
EAILKDTKQIHPCAVYLEGEYGYDDVVSGVPVMIGANGAEKIIEVTLNEKEKEMFARSCS
SVQTLIDTLNENKFFEEA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagggtaaacgtgttggaatcgtcggcgccggaaacgtaggtgccactgtcgcg
tattcactggcaatgctcgggtcatgccatgagatcattctccgcgacaataaaatcgaa
gtcgcaaagggcaaggccctcgatatgtcacaggcggcggcagcggtccgcagccacacg
gtcgtcagcgttgccgagagcatggaagagctcacggactgcgacgtcgtcgttgtcact
gccggaagcccgcgtctgccgggtatgagccgcgatgacctgctgatgatcaacgccaaa
atcaccaaagaggtcgtgcgcggcattgcaaaatactctccgaacgcgattatcattatg
gtctccaacccgctggacgcgatgacttatgtcgcgctcaaagagagcggcttcgaccgc
agccgcgtcctgggcatggccgggatcctcgacagctcccgcatggcggcgttcatccag
gagaaactgggctacggcggcggacagatccgcgcttccgtcatgggcggccacggtgac
gatatggtaccgcttccgcgctactccaccgttgcgggcgtcccgctcttcgacctcctc
accgaggatgaaatcgacgagatcgtcgaccgtacccgccacggcggcgccgagatcgtc
ggctacctcaagaccggttcggcgtactacgccccggcgaaatccacggctatcatggtc
gaagcgatcctgaaagacacgaaacagatccacccgtgcgccgtctaccttgagggcgag
tacggctacgatgacgtcgtctccggcgtcccggtcatgatcggcgccaacggcgcggaa
aagatcatcgaagtaacgctcaacgagaaagagaaagagatgttcgcgcgttcgtgcagc
tctgttcagaccctgatcgacaccctgaacgaaaacaaattctttgaggaggcctaa
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