Tissierella sp. Yu-01: P3962_06645
Help
Entry
P3962_06645 CDS
T08969
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3962_06645 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_06645 (nth)
Enzymes [BR:
tis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P3962_06645 (nth)
DNA repair and recombination proteins [BR:
tis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P3962_06645 (nth)
Prokaryotic type
P3962_06645 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WFA10222
LinkDB
All DBs
Position
complement(1323329..1323976)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKKLKKKEAKEVIDILLDIFPDAKAELNFTNPFELLIATIMSAQTTDVQVNKVTTELFK
EFKTPEDYLKLSAEQLGEKIKTIGFYNNKSRNIIATCRLLVEKYNSKVPEDRDELMTLPG
VGRKTANVVVSNAFNTPAIAVDTHVFRVSNRIGLANSDNVDDTEKDLMGIIDKEMWSKAH
HLLIFHGRRICKARRPLCEECPLTEYCYYYKKGGK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaaactaaagaagaaggaagctaaagaggtaatagatatattacttgacata
tttcctgatgcaaaagctgaactaaacttcactaatccttttgaattattgatagctact
ataatgtctgctcaaactacagacgtacaagtaaataaggtaacaacagaattatttaaa
gaatttaaaactccagaagattatttgaaactaagtgcagaacaactaggtgaaaaaata
aaaactattggattttataataataaaagtaggaacataatagctacatgtagattacta
gtagaaaaatacaatagcaaagtaccagaagacagagatgaattgatgactcttccgggt
gtaggaagaaaaactgctaatgtagtagttagtaatgcatttaacacaccagccattgct
gttgatactcatgtttttcgagtatccaatagaattggactggctaatagtgataatgtt
gatgatactgagaaggacttaatgggtataattgataaagaaatgtggtcaaaagctcat
catctattgatttttcatggaagaagaatctgcaaagcaagaagacctctttgtgaggaa
tgtcctttgacagagtattgttattactataaaaaaggagggaagtaa
DBGET
integrated database retrieval system
